RNA–Protein interactions for RNA: ENST00000438672.5

EFEMP1-206, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-206ENST00000438672 CNTNAP1P78357 1384 aa20.58■□□□□ 0.88
EFEMP1-206ENST00000438672 SCN9AQ15858 1988 aa20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 XDHP47989 1333 aa20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 RFX5P48382 616 aaPredicted RBP20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 ZC3H12CQ9C0D7 883 aaKnown RBP20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 KCNQ5Q9NR82 932 aa20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
EFEMP1-206ENST00000438672 FMR1Q06787 632 aaKnown RBP eCLIP20.56■□□□□ 0.88
EFEMP1-206ENST00000438672 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
EFEMP1-206ENST00000438672 MICALL2Q8IY33 904 aa20.56■□□□□ 0.88
EFEMP1-206ENST00000438672 TRPM4Q8TD43 1214 aa20.56■□□□□ 0.88
EFEMP1-206ENST00000438672 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
EFEMP1-206ENST00000438672 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
EFEMP1-206ENST00000438672 CNOT7Q9UIV1 285 aaKnown RBP20.55■□□□□ 0.88
EFEMP1-206ENST00000438672 TRAF5O00463 557 aa20.54■□□□□ 0.88
EFEMP1-206ENST00000438672 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
EFEMP1-206ENST00000438672 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
EFEMP1-206ENST00000438672 CHRNDQ07001 517 aa20.54■□□□□ 0.88
EFEMP1-206ENST00000438672 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
EFEMP1-206ENST00000438672 HSPA1AP0DMV8 641 aaKnown RBP20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 HSPA1BP0DMV9 641 aaKnown RBP20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 KLHDC4Q8TBB5 520 aa20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 DPF2Q92785 391 aa20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 PUS3Q9BZE2 481 aaKnown RBP20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 CNNM1Q9NRU3 951 aa20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 RIPOR2Q9Y4F9 1068 aa20.53■□□□□ 0.88
EFEMP1-206ENST00000438672 TRPM7Q96QT4 1865 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 G3V3G9 751 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 ATP2B4P23634 1241 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 DCAF8Q5TAQ9 597 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
EFEMP1-206ENST00000438672 PSME4Q14997 1843 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 H7C1D1 291 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 SRGAP3O43295 1099 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 VEGFBP49765 207 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 SAMD7Q7Z3H4 446 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 LEMD3Q9Y2U8 911 aa20.51■□□□□ 0.87
EFEMP1-206ENST00000438672 MED23Q9ULK4 1368 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 PNMA6EA0A0J9YXQ4 647 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 RASSF10A6NK89 507 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 CHMP4BQ9H444 224 aaKnown RBP20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 PGAP2Q9UHJ9 254 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
EFEMP1-206ENST00000438672 EYA2O00167 538 aa20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 EGFRP00533 1210 aa20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 TBC1D10BQ4KMP7 808 aaPredicted RBP20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 HELBQ8NG08 1087 aaPredicted RBP20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 ZNF804BA4D1E1 1349 aa20.49■□□□□ 0.87
EFEMP1-206ENST00000438672 ZNF609O15014 1411 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 TAF5LO75529 589 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 CIAO1O76071 339 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 POLA2Q14181 598 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 DEFB115Q30KQ5 88 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 IFFO2Q5TF58 517 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 CST9Q5W186 159 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 ATG9AQ7Z3C6 839 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 VGLL2Q8N8G2 317 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 SSH3Q8TE77 659 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
EFEMP1-206ENST00000438672 ATP8B2P98198 1209 aa20.47■□□□□ 0.87
EFEMP1-206ENST00000438672 SNAP23O00161 211 aa20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 CELF2O95319 508 aaKnown RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 METTL24Q5JXM2 366 aa20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 RBM26Q5T8P6 1007 aaKnown RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 COL13A1Q5TAT6 717 aaPredicted RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 RSBN1LQ6PCB5 846 aaPredicted RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 C15orf52Q6ZUT6 534 aaKnown RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 SIL1Q9H173 461 aa20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
EFEMP1-206ENST00000438672 KLRK1P26718 216 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 KCNJ4P48050 445 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 KIF4BQ2VIQ3 1234 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 PODNQ7Z5L7 613 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 TXNRD3Q86VQ6 643 aa20.45■□□□□ 0.86
EFEMP1-206ENST00000438672 PDE8BO95263 885 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 UBE4AQ14139 1066 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 PAXIP1Q6ZW49 1069 aaPredicted RBP20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 AGBL3Q8NEM8 1001 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 ZNF408Q9H9D4 720 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 TLL2Q9Y6L7 1015 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 THSD7BQ9C0I4 1608 aa20.44■□□□□ 0.86
EFEMP1-206ENST00000438672 USP17L3A6NCW0 530 aa20.43■□□□□ 0.86
EFEMP1-206ENST00000438672 USP17L4A6NCW7 530 aa20.43■□□□□ 0.86
EFEMP1-206ENST00000438672 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
EFEMP1-206ENST00000438672 USP17L1Q7RTZ2 530 aa20.43■□□□□ 0.86
EFEMP1-206ENST00000438672 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms