RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 UFL1O94874 794 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 ITGA6P23229 1130 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 EPS15P42566 896 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 EIF6P56537 245 aaKnown RBP10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 ANKRD18AQ8IVF6 992 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 DBNDD1Q9H9R9 158 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 KCNQ5Q9NR82 932 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 HACL1Q9UJ83 578 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 IQCA1LA6NCM1 817 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 PPP1R37O75864 691 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 EPHX2P34913 555 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 DOK7Q18PE1 504 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 SUCLG2Q96I99 432 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 CDC5LQ99459 802 aaKnown RBP10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 SRCIN1Q9C0H9 1055 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 MINPP1Q9UNW1 487 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 UTYO14607 1347 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 PTPRCP08575 1304 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 XDHP47989 1333 aa10.83□□□□□ -0.68
HERPUD2-206ENST00000438224 ECE2O60344 883 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 GMPSP49915 693 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 LMBR1LQ6UX01 489 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 DNAJC5GQ8N7S2 189 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
HERPUD2-206ENST00000438224 SNAP23O00161 211 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 PSMD14O00487 310 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 KLRK1P26718 216 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 APLP1P51693 650 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 RARSP54136 660 aaKnown RBP10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 TXNRD3Q86VQ6 643 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 LDHDQ86WU2 507 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 GPRC5DQ9NZD1 345 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 TNNQ9UQP3 1299 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 PASKQ96RG2 1323 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
HERPUD2-206ENST00000438224 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 CCT4P50991 539 aaKnown RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 FMR1Q06787 632 aaKnown RBP eCLIP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 TRPM4Q8TD43 1214 aa10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 ARIH1Q9Y4X5 557 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-206ENST00000438224 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 EGFRP00533 1210 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 PSEN1P49768 467 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 CHRNDQ07001 517 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 RABL6Q3YEC7 729 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 EYA3Q99504 573 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 ARID3AQ99856 593 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 CHMP3Q9Y3E7 222 aa10.79□□□□□ -0.68
HERPUD2-206ENST00000438224 MYH13Q9UKX3 1938 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 TAF5LO75529 589 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 BCAR3O75815 825 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 LMOD1P29536 600 aaPredicted RBP10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 PNMA8AQ86V59 439 aaPredicted RBP10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 PUS3Q9BZE2 481 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 ZC3H12CQ9C0D7 883 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
HERPUD2-206ENST00000438224 ZNF609O15014 1411 aa10.77□□□□□ -0.68
HERPUD2-206ENST00000438224 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 TNIP1Q15025 636 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 MPHOSPH8Q99549 860 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 ADARB2Q9NS39 739 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 PCNTO95613 3336 aa10.77□□□□□ -0.69
HERPUD2-206ENST00000438224 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms