RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MUM1L1Q5H9M0 696 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 RTL9Q8NET4 1388 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN4A-201ENST00000435607 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 SYCE3A1L190 88 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
SCN4A-201ENST00000435607 EP400NLQ6ZTU2 488 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 TMC6Q7Z403 805 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
SCN4A-201ENST00000435607 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 TACC3Q9Y6A5 838 aa12.66□□□□□ -0.38
SCN4A-201ENST00000435607 RASA3Q14644 834 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
SCN4A-201ENST00000435607 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
SCN4A-201ENST00000435607 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 PDE6BP35913 854 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 NOX5Q96PH1 765 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 AGTPBP1Q9UPW5 1226 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 ASIC1P78348 528 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN4A-201ENST00000435607 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
SCN4A-201ENST00000435607 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN4A-201ENST00000435607 TACC1O75410 805 aa12.65□□□□□ -0.39
SCN4A-201ENST00000435607 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.39
SCN4A-201ENST00000435607 MAGEB6P1A0A0J9YX57 407 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 PIK3R4Q99570 1358 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 TMEM110-MUSTN1A8MSY1 372 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 SYKP43405 635 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
SCN4A-201ENST00000435607 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 KIAA1107Q9UPP5 1409 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 ARID5AQ03989 594 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 SEPT6Q14141 434 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 MTRF1LQ9UGC7 380 aaKnown RBP12.64□□□□□ -0.39
SCN4A-201ENST00000435607 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
SCN4A-201ENST00000435607 STRN3Q13033 797 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 TRPC3Q13507 836 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
SCN4A-201ENST00000435607 DNM2P50570 870 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 GPR161Q8N6U8 529 aaKnown RBP12.63□□□□□ -0.39
SCN4A-201ENST00000435607 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 KCNG4Q8TDN1 519 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 STIM2Q9P246 746 aa12.63□□□□□ -0.39
SCN4A-201ENST00000435607 HAND2P61296 217 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 TTC6Q86TZ1 520 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 RTEL1Q9NZ71 1219 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
SCN4A-201ENST00000435607 KRT83P78385 493 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 CLUL1Q15846 466 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 UTP14CQ5TAP6 766 aaKnown RBP12.62□□□□□ -0.39
SCN4A-201ENST00000435607 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 KIF11P52732 1056 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 BIN1O00499 593 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
SCN4A-201ENST00000435607 EXOC7Q9UPT5 735 aa12.62□□□□□ -0.39
SCN4A-201ENST00000435607 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCN4A-201ENST00000435607 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 MAST3O60307 1309 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 TTC36A6NLP5 189 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 TUBB4BP68371 445 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 SUPT20HQ8NEM7 779 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 BIRC3Q13489 604 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
SCN4A-201ENST00000435607 SP4Q02446 784 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 SUPT6HQ7KZ85 1726 aaKnown RBP12.61□□□□□ -0.39
SCN4A-201ENST00000435607 ATP5DP30049 168 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 ZNF830Q96NB3 372 aaPredicted RBP12.61□□□□□ -0.39
SCN4A-201ENST00000435607 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 FLIIQ13045 1269 aa12.61□□□□□ -0.39
SCN4A-201ENST00000435607 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms