RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 LEMD3Q9Y2U8 911 aa18.33■□□□□ 0.52
TMEM40-204ENST00000435218 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
TMEM40-204ENST00000435218 PODXL2Q9NZ53 605 aa18.32■□□□□ 0.52
TMEM40-204ENST00000435218 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 H0YIN7 160 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 SNAP23O00161 211 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 PHKA1P46020 1223 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 C15orf52Q6ZUT6 534 aaKnown RBP18.31■□□□□ 0.52
TMEM40-204ENST00000435218 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 KBTBD3Q8NAB2 608 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 CCDC88AQ3V6T2 1871 aa18.31■□□□□ 0.52
TMEM40-204ENST00000435218 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
TMEM40-204ENST00000435218 MCAMP43121 646 aa18.3■□□□□ 0.52
TMEM40-204ENST00000435218 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
TMEM40-204ENST00000435218 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
TMEM40-204ENST00000435218 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
TMEM40-204ENST00000435218 DUOX1Q9NRD9 1551 aa18.29■□□□□ 0.52
TMEM40-204ENST00000435218 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
TMEM40-204ENST00000435218 SCARF1Q14162 830 aa18.29■□□□□ 0.52
TMEM40-204ENST00000435218 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
TMEM40-204ENST00000435218 RAD50Q92878 1312 aa18.29■□□□□ 0.52
TMEM40-204ENST00000435218 REC8O95072 547 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 KCNJ4P48050 445 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
TMEM40-204ENST00000435218 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
TMEM40-204ENST00000435218 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 TBC1D32Q96NH3 1257 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 PDS5AQ29RF7 1337 aaKnown RBP18.28■□□□□ 0.52
TMEM40-204ENST00000435218 GOLIM4O00461 696 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 SEMA3EO15041 775 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 SGSM2O43147 1006 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
TMEM40-204ENST00000435218 FBXO33Q7Z6M2 555 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 CNKSR1Q969H4 720 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
TMEM40-204ENST00000435218 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 DIAPH3Q9NSV4 1193 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
TMEM40-204ENST00000435218 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.52
TMEM40-204ENST00000435218 POLD1P28340 1107 aa18.27■□□□□ 0.51
TMEM40-204ENST00000435218 ZAP70P43403 619 aa18.27■□□□□ 0.51
TMEM40-204ENST00000435218 BCAMP50895 628 aa18.27■□□□□ 0.51
TMEM40-204ENST00000435218 GPSM2P81274 684 aa18.27■□□□□ 0.51
TMEM40-204ENST00000435218 FAM84BQ96KN1 310 aaPredicted RBP18.27■□□□□ 0.51
TMEM40-204ENST00000435218 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.51
TMEM40-204ENST00000435218 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.51
TMEM40-204ENST00000435218 WTIPA6NIX2 430 aaPredicted RBP18.26■□□□□ 0.51
TMEM40-204ENST00000435218 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
TMEM40-204ENST00000435218 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
TMEM40-204ENST00000435218 FKBP4Q02790 459 aaKnown RBP eCLIP18.26■□□□□ 0.51
TMEM40-204ENST00000435218 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
TMEM40-204ENST00000435218 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
TMEM40-204ENST00000435218 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
TMEM40-204ENST00000435218 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
TMEM40-204ENST00000435218 CYP2E1P05181 493 aaPredicted RBP18.25■□□□□ 0.51
TMEM40-204ENST00000435218 GYG1P46976 350 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 CHD4Q14839 1912 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
TMEM40-204ENST00000435218 ZFYP08048 801 aaPredicted RBP18.24■□□□□ 0.51
TMEM40-204ENST00000435218 HIBADHP31937 336 aaKnown RBP18.24■□□□□ 0.51
TMEM40-204ENST00000435218 PI16Q6UXB8 463 aa18.24■□□□□ 0.51
TMEM40-204ENST00000435218 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM40-204ENST00000435218 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
TMEM40-204ENST00000435218 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
TMEM40-204ENST00000435218 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
TMEM40-204ENST00000435218 COL1A1P02452 1464 aaPredicted RBP18.24■□□□□ 0.51
TMEM40-204ENST00000435218 CHRNA5P30532 468 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
TMEM40-204ENST00000435218 CWC27Q6UX04 472 aaKnown RBP18.23■□□□□ 0.51
TMEM40-204ENST00000435218 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 IL25Q9H293 177 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 UFL1O94874 794 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 KLRK1P26718 216 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
TMEM40-204ENST00000435218 CC2D2BQ6DHV5 1058 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 VPS37DQ86XT2 251 aa18.23■□□□□ 0.51
TMEM40-204ENST00000435218 IGSF3O75054 1194 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 TGFB2P61812 414 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
TMEM40-204ENST00000435218 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
TMEM40-204ENST00000435218 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 POLLQ9UGP5 575 aa18.22■□□□□ 0.51
TMEM40-204ENST00000435218 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
TMEM40-204ENST00000435218 PSME4Q14997 1843 aa18.21■□□□□ 0.51
TMEM40-204ENST00000435218 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
TMEM40-204ENST00000435218 A0A0D9SFI3 127 aa18.21■□□□□ 0.51
TMEM40-204ENST00000435218 RNF113AO15541 343 aaKnown RBP18.21■□□□□ 0.51
TMEM40-204ENST00000435218 GRIPAP1Q4V328 841 aa18.21■□□□□ 0.51
TMEM40-204ENST00000435218 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms