RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 CACNA1FO60840 1977 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 C3P01024 1663 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 NAT1P18440 290 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 NEXNQ0ZGT2 675 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 CDK19Q9BWU1 502 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 ODF2LQ9ULJ1 636 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 FAM208AQ9UK61 1670 aaKnown RBP8.45□□□□□ -1.06
GARNL3-205ENST00000435213 XRN1Q8IZH2 1706 aaKnown RBP8.45□□□□□ -1.06
GARNL3-205ENST00000435213 SMAPO00193 183 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 MRPL12P52815 198 aaKnown RBP8.45□□□□□ -1.06
GARNL3-205ENST00000435213 UBE2HP62256 183 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 TDRD7Q8NHU6 1098 aaKnown RBP8.45□□□□□ -1.06
GARNL3-205ENST00000435213 SYNPO2Q9UMS6 1093 aa8.45□□□□□ -1.06
GARNL3-205ENST00000435213 AOX1Q06278 1338 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 CLCN6P51797 869 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 MEIS3Q99687 375 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 STK31Q9BXU1 1019 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 UBA5Q9GZZ9 404 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 ADAM21Q9UKJ8 722 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 MYO6Q9UM54 1294 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 CHD2O14647 1828 aaKnown RBP8.44□□□□□ -1.06
GARNL3-205ENST00000435213 RGPD1P0DJD0 1748 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 ARHGEF10O15013 1369 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 CHUKO15111 745 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
GARNL3-205ENST00000435213 LRRC31Q6UY01 552 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 TAX1BP1Q86VP1 789 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 NME8Q8N427 588 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 KCNV2Q8TDN2 545 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 PLEKHG4BQ96PX9 1271 aa8.44□□□□□ -1.06
GARNL3-205ENST00000435213 ECM2O94769 699 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 HSPA2P54652 639 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 SMC1AQ14683 1233 aaKnown RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 SAAL1Q96ER3 474 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 CRYBG1Q9Y4K1 1723 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 GPTP24298 496 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 CHMLP26374 656 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 SCRN1Q12765 414 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 REXO1L1PQ8IX06 675 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 BICD1Q96G01 975 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 FUCA2Q9BTY2 467 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 UBXN6Q9BZV1 441 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 CWC25Q9NXE8 425 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 PALD1Q9ULE6 856 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 ATP6V1DQ9Y5K8 247 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 ELP1O95163 1332 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 APBB1O00213 710 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 RAD21O60216 631 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 CCT4P50991 539 aaKnown RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 DDR1Q08345 913 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 HELBQ8NG08 1087 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 KCNF1Q9H3M0 494 aa8.43□□□□□ -1.06
GARNL3-205ENST00000435213 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
GARNL3-205ENST00000435213 ZSCAN22P10073 491 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CLNS1AP54105 237 aaKnown RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 POTEDQ86YR6 584 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CHL1O00533 1208 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 RTN2O75298 545 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 PEX19P40855 299 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CPLX2Q6PUV4 134 aaKnown RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 ANO2Q9NQ90 1003 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 UTP6Q9NYH9 597 aaKnown RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 EXOC6BQ9Y2D4 811 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CDR1P51861 262 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 CABS1Q96KC9 395 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 UTP14AQ9BVJ6 771 aaKnown RBP8.42□□□□□ -1.06
GARNL3-205ENST00000435213 LRRCC1Q9C099 1032 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
GARNL3-205ENST00000435213 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 PREPLQ4J6C6 727 aaPredicted RBP8.41□□□□□ -1.06
GARNL3-205ENST00000435213 AGAP3Q96P47 875 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 NALCNQ8IZF0 1738 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 IPO5O00410 1097 aaKnown RBP8.41□□□□□ -1.06
GARNL3-205ENST00000435213 HSPA4P34932 840 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 IDI1Q13907 227 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 PTPN14Q15678 1187 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 C3orf20Q8ND61 904 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 MIPOL1Q8TD10 442 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 KIF9Q9HAQ2 790 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 CNPY2Q9Y2B0 182 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 FMN2Q9NZ56 1722 aa8.41□□□□□ -1.06
GARNL3-205ENST00000435213 SYNRGQ9UMZ2 1314 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms