RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 ITGA6P23229 1130 aa28.53■■■□□ 2.16
HMG20B-205ENST00000435022 MXD3Q9BW11 206 aa28.53■■■□□ 2.16
HMG20B-205ENST00000435022 PODNQ7Z5L7 613 aa28.52■■■□□ 2.16
HMG20B-205ENST00000435022 DCPSQ96C86 337 aaKnown RBP28.52■■■□□ 2.16
HMG20B-205ENST00000435022 USP17L3A6NCW0 530 aa28.51■■■□□ 2.15
HMG20B-205ENST00000435022 USP17L4A6NCW7 530 aa28.51■■■□□ 2.15
HMG20B-205ENST00000435022 HUNKP57058 714 aa28.51■■■□□ 2.15
HMG20B-205ENST00000435022 USP17L1Q7RTZ2 530 aa28.51■■■□□ 2.15
HMG20B-205ENST00000435022 GBA2Q9HCG7 927 aaPredicted RBP28.51■■■□□ 2.15
HMG20B-205ENST00000435022 FAM155AB1AL88 458 aaPredicted RBP28.5■■■□□ 2.15
HMG20B-205ENST00000435022 DACT2Q5SW24 774 aa28.5■■■□□ 2.15
HMG20B-205ENST00000435022 BEND3Q5T5X7 828 aa28.5■■■□□ 2.15
HMG20B-205ENST00000435022 SCARF1Q14162 830 aa28.49■■■□□ 2.15
HMG20B-205ENST00000435022 ANGEL2Q5VTE6 544 aaKnown RBP28.49■■■□□ 2.15
HMG20B-205ENST00000435022 MYH16Q9H6N6 1097 aa28.49■■■□□ 2.15
HMG20B-205ENST00000435022 IRS2Q9Y4H2 1338 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 USP17L8P0C7I0 530 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 IGHMBP2P38935 993 aaKnown RBP28.48■■■□□ 2.15
HMG20B-205ENST00000435022 BRPF1P55201 1214 aaPredicted RBP28.48■■■□□ 2.15
HMG20B-205ENST00000435022 FOXO4P98177 505 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 CDCA5Q96FF9 252 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 MYOZ2Q9NPC6 264 aa28.48■■■□□ 2.15
HMG20B-205ENST00000435022 SCAF8Q9UPN6 1271 aaKnown RBP28.47■■■□□ 2.15
HMG20B-205ENST00000435022 LEMD3Q9Y2U8 911 aa28.47■■■□□ 2.15
HMG20B-205ENST00000435022 ZNF521Q96K83 1311 aa28.46■■■□□ 2.15
HMG20B-205ENST00000435022 SNAP23O00161 211 aa28.46■■■□□ 2.15
HMG20B-205ENST00000435022 EPHA10Q5JZY3 1008 aa28.46■■■□□ 2.15
HMG20B-205ENST00000435022 SULF1Q8IWU6 871 aa28.46■■■□□ 2.15
HMG20B-205ENST00000435022 ZNF804BA4D1E1 1349 aa28.45■■■□□ 2.15
HMG20B-205ENST00000435022 RGMBQ6NW40 437 aa28.45■■■□□ 2.14
HMG20B-205ENST00000435022 BEGAINQ9BUH8 593 aa28.45■■■□□ 2.14
HMG20B-205ENST00000435022 COA1Q9GZY4 146 aa28.45■■■□□ 2.14
HMG20B-205ENST00000435022 CHRNDQ07001 517 aa28.44■■■□□ 2.14
HMG20B-205ENST00000435022 NOGQ13253 232 aa28.44■■■□□ 2.14
HMG20B-205ENST00000435022 NBPF9Q3BBW0 867 aa28.43■■■□□ 2.14
HMG20B-205ENST00000435022 C2orf69Q8N8R5 385 aa28.43■■■□□ 2.14
HMG20B-205ENST00000435022 STRIP1Q5VSL9 837 aa28.42■■■□□ 2.14
HMG20B-205ENST00000435022 MPHOSPH8Q99549 860 aa28.42■■■□□ 2.14
HMG20B-205ENST00000435022 ANKRD2Q9GZV1 360 aa28.42■■■□□ 2.14
HMG20B-205ENST00000435022 PAPPA2Q9BXP8 1791 aa28.42■■■□□ 2.14
HMG20B-205ENST00000435022 PITPNM2Q9BZ72 1349 aa28.42■■■□□ 2.14
HMG20B-205ENST00000435022 ABHD8Q96I13 439 aa28.41■■■□□ 2.14
HMG20B-205ENST00000435022 ANKRD18BA2A2Z9 1011 aa28.4■■■□□ 2.14
HMG20B-205ENST00000435022 HELBQ8NG08 1087 aaPredicted RBP28.4■■■□□ 2.14
HMG20B-205ENST00000435022 FBXW7Q969H0 707 aa28.4■■■□□ 2.14
HMG20B-205ENST00000435022 CASP8AP2Q9UKL3 1982 aa28.4■■■□□ 2.14
HMG20B-205ENST00000435022 TAF5LO75529 589 aa28.39■■■□□ 2.14
HMG20B-205ENST00000435022 WNT10BO00744 389 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 CA12O43570 354 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 SLC10A3P09131 477 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 PRAMEF18Q5VWM3 479 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 LMBR1LQ6UX01 489 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 MOB2Q70IA6 237 aa28.38■■■□□ 2.13
HMG20B-205ENST00000435022 GRM8O00222 908 aa28.37■■■□□ 2.13
HMG20B-205ENST00000435022 ZNF157P51786 506 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-205ENST00000435022 KIF23Q02241 960 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-205ENST00000435022 ZNF594Q96JF6 807 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-205ENST00000435022 MYO3BQ8WXR4 1341 aa28.37■■■□□ 2.13
HMG20B-205ENST00000435022 SASH1O94885 1247 aa28.36■■■□□ 2.13
HMG20B-205ENST00000435022 GTF2IP78347 998 aa28.36■■■□□ 2.13
HMG20B-205ENST00000435022 IFIT5Q13325 482 aaKnown RBP28.36■■■□□ 2.13
HMG20B-205ENST00000435022 TTLL5Q6EMB2 1281 aa28.36■■■□□ 2.13
HMG20B-205ENST00000435022 C15orf52Q6ZUT6 534 aaKnown RBP28.36■■■□□ 2.13
HMG20B-205ENST00000435022 ZBED3Q96IU2 234 aaPredicted RBP28.36■■■□□ 2.13
HMG20B-205ENST00000435022 CD209Q9NNX6 404 aa28.36■■■□□ 2.13
HMG20B-205ENST00000435022 RASAL3Q86YV0 1011 aa28.35■■■□□ 2.13
HMG20B-205ENST00000435022 CERS5Q8N5B7 392 aa28.35■■■□□ 2.13
HMG20B-205ENST00000435022 CCDC102AQ96A19 550 aa28.35■■■□□ 2.13
HMG20B-205ENST00000435022 KAZALD1Q96I82 304 aa28.35■■■□□ 2.13
HMG20B-205ENST00000435022 CHMP3Q9Y3E7 222 aa28.35■■■□□ 2.13
HMG20B-205ENST00000435022 KIAA0825Q8IV33 1275 aa28.34■■■□□ 2.13
HMG20B-205ENST00000435022 KCNJ4P48050 445 aa28.33■■■□□ 2.13
HMG20B-205ENST00000435022 ALDH1L1O75891 902 aa28.32■■■□□ 2.12
HMG20B-205ENST00000435022 OGFOD1Q8N543 542 aa28.32■■■□□ 2.12
HMG20B-205ENST00000435022 SUCLG2Q96I99 432 aa28.32■■■□□ 2.12
HMG20B-205ENST00000435022 FKBP1BP68106 108 aa28.31■■■□□ 2.12
HMG20B-205ENST00000435022 SLC4A10Q6U841 1118 aa28.31■■■□□ 2.12
HMG20B-205ENST00000435022 PCDHAC2Q9Y5I4 1007 aa28.31■■■□□ 2.12
HMG20B-205ENST00000435022 CSRNP1Q96S65 589 aa28.3■■■□□ 2.12
HMG20B-205ENST00000435022 SRCIN1Q9C0H9 1055 aa28.3■■■□□ 2.12
HMG20B-205ENST00000435022 NBPF7P0C2Y1 421 aaPredicted RBP28.29■■■□□ 2.12
HMG20B-205ENST00000435022 IL1R1P14778 569 aa28.29■■■□□ 2.12
HMG20B-205ENST00000435022 MRPL50Q8N5N7 158 aaKnown RBP28.29■■■□□ 2.12
HMG20B-205ENST00000435022 MCOLN1Q9GZU1 580 aa28.29■■■□□ 2.12
HMG20B-205ENST00000435022 RNF186Q9NXI6 227 aa28.29■■■□□ 2.12
HMG20B-205ENST00000435022 C9orf78Q9NZ63 289 aaPredicted RBP28.29■■■□□ 2.12
HMG20B-205ENST00000435022 AKAP11Q9UKA4 1901 aa28.29■■■□□ 2.12
HMG20B-205ENST00000435022 UTYO14607 1347 aa28.28■■■□□ 2.12
HMG20B-205ENST00000435022 ECM29Q5VYK3 1845 aa28.28■■■□□ 2.12
HMG20B-205ENST00000435022 UBE2Q2LH0YL09 131 aa28.28■■■□□ 2.12
HMG20B-205ENST00000435022 PUS3Q9BZE2 481 aaKnown RBP28.28■■■□□ 2.12
HMG20B-205ENST00000435022 AOX1Q06278 1338 aa28.27■■■□□ 2.12
HMG20B-205ENST00000435022 CCDC57Q2TAC2 916 aa28.27■■■□□ 2.12
HMG20B-205ENST00000435022 LDHAL6AQ6ZMR3 332 aa28.27■■■□□ 2.12
HMG20B-205ENST00000435022 SAGE1Q9NXZ1 904 aa28.27■■■□□ 2.12
HMG20B-205ENST00000435022 JAG2Q9Y219 1238 aa28.26■■■□□ 2.11
HMG20B-205ENST00000435022 SSC5DA1L4H1 1573 aa28.25■■■□□ 2.11
HMG20B-205ENST00000435022 PLIN1O60240 522 aa28.25■■■□□ 2.11
HMG20B-205ENST00000435022 TRPA1O75762 1119 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms