RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 EDEM1Q92611 657 aa8.17□□□□□ -1.1
PTPN4-205ENST00000433888 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
PTPN4-205ENST00000433888 ADAM11O75078 769 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 PDGFAP04085 211 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
PTPN4-205ENST00000433888 ACPPP15309 386 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 SSFA2P28290 1259 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 NOM1Q5C9Z4 860 aaKnown RBP8.16□□□□□ -1.1
PTPN4-205ENST00000433888 NCAPG2Q86XI2 1143 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 KLHL23Q8NBE8 558 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
PTPN4-205ENST00000433888 KLHDC7BQ96G42 594 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 RAXQ9Y2V3 346 aa8.16□□□□□ -1.1
PTPN4-205ENST00000433888 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
PTPN4-205ENST00000433888 DDX3YO15523 660 aaKnown RBP8.15□□□□□ -1.1
PTPN4-205ENST00000433888 NPR3P17342 541 aa8.15□□□□□ -1.1
PTPN4-205ENST00000433888 CDC25BP30305 580 aa8.15□□□□□ -1.1
PTPN4-205ENST00000433888 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
PTPN4-205ENST00000433888 DZANK1Q9NVP4 752 aa8.15□□□□□ -1.1
PTPN4-205ENST00000433888 A6NHS1 94 aa8.14□□□□□ -1.11
PTPN4-205ENST00000433888 PTPRAP18433 802 aa8.14□□□□□ -1.11
PTPN4-205ENST00000433888 MPSTP25325 297 aa8.14□□□□□ -1.11
PTPN4-205ENST00000433888 MZF1P28698 734 aaPredicted RBP8.14□□□□□ -1.11
PTPN4-205ENST00000433888 EIF1AXP47813 144 aaKnown RBP8.14□□□□□ -1.11
PTPN4-205ENST00000433888 DNM1Q05193 864 aaKnown RBP8.14□□□□□ -1.11
PTPN4-205ENST00000433888 ACAD11Q709F0 780 aa8.14□□□□□ -1.11
PTPN4-205ENST00000433888 GTF3C2Q8WUA4 911 aaPredicted RBP8.14□□□□□ -1.11
PTPN4-205ENST00000433888 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
PTPN4-205ENST00000433888 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
PTPN4-205ENST00000433888 TRPA1O75762 1119 aa8.13□□□□□ -1.11
PTPN4-205ENST00000433888 WNT8BQ93098 351 aa8.13□□□□□ -1.11
PTPN4-205ENST00000433888 H3BRJ5 948 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 CES1P23141 567 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 DUOXA2Q1HG44 320 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 FAM117BQ6P1L5 589 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 UBASH3BQ8TF42 649 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 HHIPQ96QV1 700 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 CEP41Q9BYV8 373 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 OSGEPQ9NPF4 335 aa8.12□□□□□ -1.11
PTPN4-205ENST00000433888 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
PTPN4-205ENST00000433888 IGLV1-40P01703 118 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 PIP4K2BP78356 416 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 MTMR3Q13615 1198 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 PMEPA1Q969W9 287 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 SOX13Q9UN79 622 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
PTPN4-205ENST00000433888 PDE2AO00408 941 aaPredicted RBP8.1□□□□□ -1.11
PTPN4-205ENST00000433888 MED26O95402 600 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 PCSK2P16519 638 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 CD97P48960 835 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 HGSNATQ68CP4 663 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 ALKBH2Q6NS38 261 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 TMEM102Q8N9M5 508 aaPredicted RBP8.1□□□□□ -1.11
PTPN4-205ENST00000433888 NXPE3Q969Y0 559 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
PTPN4-205ENST00000433888 EREGO14944 169 aa8.09□□□□□ -1.11
PTPN4-205ENST00000433888 GSC2O15499 205 aa8.09□□□□□ -1.11
PTPN4-205ENST00000433888 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
PTPN4-205ENST00000433888 MYRFLQ96LU7 910 aa8.09□□□□□ -1.11
PTPN4-205ENST00000433888 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
PTPN4-205ENST00000433888 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
PTPN4-205ENST00000433888 SSTR4P31391 388 aa8.08□□□□□ -1.12
PTPN4-205ENST00000433888 FZD6O60353 706 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 CABP4P57796 275 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 ZDHHC13Q8IUH4 622 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 TRIM42Q8IWZ5 723 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 UTP4Q969X6 686 aaKnown RBP8.07□□□□□ -1.12
PTPN4-205ENST00000433888 C7orf69Q9H7B7 122 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 PCMTD2Q9NV79 361 aa8.07□□□□□ -1.12
PTPN4-205ENST00000433888 HMX2A2RU54 273 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 FAM177BA6PVY3 158 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 KIAA1324LA8MWY0 1029 aaPredicted RBP8.06□□□□□ -1.12
PTPN4-205ENST00000433888 SOX1O00570 391 aaPredicted RBP8.06□□□□□ -1.12
PTPN4-205ENST00000433888 TGFB1P01137 390 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 NFIAQ12857 509 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 FAM20CQ8IXL6 584 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 OSMRQ99650 979 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 ZKSCAN3Q9BRR0 538 aa8.06□□□□□ -1.12
PTPN4-205ENST00000433888 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
PTPN4-205ENST00000433888 CARNS1A5YM72 827 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 PRR19A6NJB7 356 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 FAM13AO94988 1023 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 PREPP48147 710 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 RNF43Q68DV7 783 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.05□□□□□ -1.12
PTPN4-205ENST00000433888 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 BSNDQ8WZ55 320 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 KRTAP4-12Q9BQ66 201 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 RNF208Q9H0X6 261 aa8.05□□□□□ -1.12
PTPN4-205ENST00000433888 NLRP12P59046 1061 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms