RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 G2E3Q7L622 706 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 SSH3Q8TE77 659 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 GBP4Q96PP9 640 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 LRRCC1Q9C099 1032 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 TLL2Q9Y6L7 1015 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 COL22A1Q8NFW1 1626 aaPredicted RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 CEP350Q5VT06 3117 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 CRYBG1Q9Y4K1 1723 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 ERC2O15083 957 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 GCP02774 474 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
COL17A1-204ENST00000433822 SDSP20132 328 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 MCM2P49736 904 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 NBPF6Q5VWK0 638 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 CCDC125Q86Z20 511 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 NBPF4Q96M43 638 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 CWC22Q9HCG8 908 aaKnown RBP9.1□□□□□ -0.95
COL17A1-204ENST00000433822 TRPC5Q9UL62 973 aaPredicted RBP9.1□□□□□ -0.95
COL17A1-204ENST00000433822 UTRNP46939 3433 aa9.1□□□□□ -0.95
COL17A1-204ENST00000433822 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 MRC1P22897 1456 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 USP42Q9H9J4 1324 aaKnown RBP9.09□□□□□ -0.95
COL17A1-204ENST00000433822 ALDH1L1O75891 902 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 ATF3P18847 181 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 C19orf44Q9H6X5 657 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 SCN11AQ9UI33 1791 aa9.09□□□□□ -0.95
COL17A1-204ENST00000433822 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
COL17A1-204ENST00000433822 FSD2A1L4K1 749 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 RNMTO43148 476 aaKnown RBP9.08□□□□□ -0.96
COL17A1-204ENST00000433822 ADH1CP00326 375 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
COL17A1-204ENST00000433822 NUCB2P80303 420 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 PURBQ96QR8 312 aaKnown RBP9.08□□□□□ -0.96
COL17A1-204ENST00000433822 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
COL17A1-204ENST00000433822 COL18A1P39060 1754 aa9.08□□□□□ -0.96
COL17A1-204ENST00000433822 UTYO14607 1347 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 F6X3S4 739 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 TIMP2P16035 220 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 MX1P20591 662 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
COL17A1-204ENST00000433822 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
COL17A1-204ENST00000433822 TEFQ10587 303 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 C1orf141Q5JVX7 400 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 ZNF530Q6P9A1 599 aaPredicted RBP9.07□□□□□ -0.96
COL17A1-204ENST00000433822 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 LRRC59Q96AG4 307 aaKnown RBP9.07□□□□□ -0.96
COL17A1-204ENST00000433822 KIF1BPQ96EK5 621 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 PKD1L3Q7Z443 1732 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 COL15A1P39059 1388 aa9.07□□□□□ -0.96
COL17A1-204ENST00000433822 TNS1Q9HBL0 1735 aaKnown RBP9.06□□□□□ -0.96
COL17A1-204ENST00000433822 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
COL17A1-204ENST00000433822 MCCP23508 829 aa9.06□□□□□ -0.96
COL17A1-204ENST00000433822 BEND3Q5T5X7 828 aa9.06□□□□□ -0.96
COL17A1-204ENST00000433822 FNBP4Q8N3X1 1017 aaPredicted RBP9.06□□□□□ -0.96
COL17A1-204ENST00000433822 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
COL17A1-204ENST00000433822 CPDO75976 1380 aa9.06□□□□□ -0.96
COL17A1-204ENST00000433822 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 PXDNQ92626 1479 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 ADCY9O60503 1353 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 PNMA6EA0A0J9YXQ4 647 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 BTBD11A6QL63 1104 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 GOLGA6L22H0YM25 854 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 TRAK2O60296 914 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 GIGYF1O75420 1035 aaPredicted RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 NDUFV2P19404 249 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 MTMR2Q13614 643 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 KRT28Q7Z3Y7 464 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 ERC1Q8IUD2 1116 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 C16orf71Q8IYS4 520 aaPredicted RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 FAM174AQ8TBP5 190 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 OTUD7AQ8TE49 926 aaPredicted RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 ANKRD24Q8TF21 1146 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 INTS4Q96HW7 963 aaKnown RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 LRRFIP2Q9Y608 721 aaKnown RBP9.05□□□□□ -0.96
COL17A1-204ENST00000433822 AK9Q5TCS8 1911 aa9.05□□□□□ -0.96
COL17A1-204ENST00000433822 MOXD2PA6NHM9 499 aa9.04□□□□□ -0.96
COL17A1-204ENST00000433822 DDX58O95786 925 aaKnown RBP9.04□□□□□ -0.96
COL17A1-204ENST00000433822 HSP90AA1P07900 732 aaKnown RBP9.04□□□□□ -0.96
COL17A1-204ENST00000433822 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
COL17A1-204ENST00000433822 TNPO1Q92973 898 aaKnown RBP9.04□□□□□ -0.96
COL17A1-204ENST00000433822 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
COL17A1-204ENST00000433822 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
COL17A1-204ENST00000433822 TNS3Q68CZ2 1445 aa9.04□□□□□ -0.96
COL17A1-204ENST00000433822 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
COL17A1-204ENST00000433822 LOC100996750A0A140TA64 210 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
COL17A1-204ENST00000433822 CHMLP26374 656 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms