RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 LRRC7Q96NW7 1537 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 HOOK1Q9UJC3 728 aaKnown RBP14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 PDE8AO60658 829 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 ANAPC15P60006 121 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 C17orf53Q8N3J3 647 aaPredicted RBP14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 HMG20BQ9P0W2 317 aa14.54□□□□□ -0.08
LRRTM1-206ENST00000433224 B4E1Z4 1266 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 SYT1P21579 422 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 KDRP35968 1356 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 SEC31BQ9NQW1 1179 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 KLHL10Q6JEL2 608 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 JMYQ8N9B5 988 aa14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 IBTKQ9P2D0 1353 aaPredicted RBP14.53□□□□□ -0.08
LRRTM1-206ENST00000433224 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 LMBRD1Q9NUN5 540 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 DYNC1I1O14576 645 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 GPAA1O43292 621 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 MARCKSP29966 332 aaPredicted RBP14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 HLFQ16534 295 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 SOGA3Q5TF21 947 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 RUFY3Q7L099 469 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 MNS1Q8NEH6 495 aa14.52□□□□□ -0.08
LRRTM1-206ENST00000433224 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
LRRTM1-206ENST00000433224 HSP90AA4PQ58FG1 418 aa14.52□□□□□ -0.09
LRRTM1-206ENST00000433224 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
LRRTM1-206ENST00000433224 TMEM63CQ9P1W3 806 aa14.52□□□□□ -0.09
LRRTM1-206ENST00000433224 ADGRB1O14514 1584 aa14.52□□□□□ -0.09
LRRTM1-206ENST00000433224 KCNQ2O43526 872 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 ZFYP08048 801 aaPredicted RBP14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 GYG1P46976 350 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 NOLC1Q14978 699 aaKnown RBP eCLIP14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 TSC1Q92574 1164 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 SCAND2PQ9GZW5 306 aaPredicted RBP14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 ZBTB43O43298 467 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 ST5P78524 1137 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 CNBD1Q8NA66 436 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 IGSF3O75054 1194 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 SASH1O94885 1247 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 BCAMP50895 628 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 ADCK5Q3MIX3 580 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 MCM9Q9NXL9 1143 aa14.51□□□□□ -0.09
LRRTM1-206ENST00000433224 JAK2O60674 1132 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 WTAPQ15007 396 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 DIP2BQ9P265 1576 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 RAD50Q92878 1312 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 SERPINC1P01008 464 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 CCDC96Q2M329 555 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 FAM177A1Q8N128 213 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 NAT10Q9H0A0 1025 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 hCG_1642624A0A1W2PR95 340 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 TSR1Q2NL82 804 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 ERBB4Q15303 1308 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 DHX32Q7L7V1 743 aaKnown RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 CATIPQ7Z7H3 387 aa14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 RNF41Q9H4P4 317 aaPredicted RBP14.5□□□□□ -0.09
LRRTM1-206ENST00000433224 ALG1Q9BT22 464 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 TRMT1Q9NXH9 659 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 MAGEB6P1A0A0J9YX57 407 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 CTSWP56202 376 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 UBE2HP62256 183 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 SAP30BPQ9UHR5 308 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 MYO3AQ8NEV4 1616 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 PTPDC1A2A3K4 754 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 F13A1P00488 732 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 PHKA1P46020 1223 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 NLRP5P59047 1200 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 PUM3Q15397 648 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 CDK5RAP3Q96JB5 506 aa14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 CCDC43Q96MW1 224 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 ZC3H12CQ9C0D7 883 aaKnown RBP14.49□□□□□ -0.09
LRRTM1-206ENST00000433224 CTDSPL2Q05D32 466 aa14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 ZNF589Q86UQ0 364 aaPredicted RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 CCDC47Q96A33 483 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 DACT1Q9NYF0 836 aa14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 ZNF532Q9HCE3 1301 aa14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 ZNF445P59923 1031 aa14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 GIGYF2Q6Y7W6 1299 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 ZBTB38Q8NAP3 1195 aaPredicted RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-206ENST00000433224 GADD45BO75293 160 aaPredicted RBP14.47□□□□□ -0.09
LRRTM1-206ENST00000433224 TRIM37O94972 964 aa14.47□□□□□ -0.09
LRRTM1-206ENST00000433224 TPM1P09493 284 aa14.47□□□□□ -0.09
LRRTM1-206ENST00000433224 ERICH4A6NGS2 130 aa14.47□□□□□ -0.09
LRRTM1-206ENST00000433224 UFL1O94874 794 aa14.47□□□□□ -0.09
LRRTM1-206ENST00000433224 TNNT1P13805 278 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms