RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 MPHOSPH8Q99549 860 aa23.4■■□□□ 1.34
VRK2-205ENST00000432057 FGFR2P21802 821 aa23.39■■□□□ 1.34
VRK2-205ENST00000432057 BLOC1S2Q6QNY1 142 aa23.39■■□□□ 1.34
VRK2-205ENST00000432057 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.34
VRK2-205ENST00000432057 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.34
VRK2-205ENST00000432057 SRP68Q9UHB9 627 aaKnown RBP23.39■■□□□ 1.34
VRK2-205ENST00000432057 TBC1D9BQ66K14 1250 aa23.39■■□□□ 1.33
VRK2-205ENST00000432057 RPS6KB1P23443 525 aa23.38■■□□□ 1.33
VRK2-205ENST00000432057 PHKA1P46020 1223 aa23.38■■□□□ 1.33
VRK2-205ENST00000432057 LPIN2Q92539 896 aa23.38■■□□□ 1.33
VRK2-205ENST00000432057 NARFQ9UHQ1 456 aa23.38■■□□□ 1.33
VRK2-205ENST00000432057 CYP21A2P08686 494 aa23.37■■□□□ 1.33
VRK2-205ENST00000432057 CCDC102BQ68D86 513 aa23.37■■□□□ 1.33
VRK2-205ENST00000432057 OSBP2Q969R2 916 aa23.37■■□□□ 1.33
VRK2-205ENST00000432057 ZNF512BQ96KM6 892 aaPredicted RBP23.37■■□□□ 1.33
VRK2-205ENST00000432057 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
VRK2-205ENST00000432057 DSCC1Q9BVC3 393 aa23.37■■□□□ 1.33
VRK2-205ENST00000432057 IGHMBP2P38935 993 aaKnown RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 LRRFIP1Q32MZ4 808 aaKnown RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 FOXD4L5Q5VV16 416 aaPredicted RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 C3orf67Q6ZVT6 689 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 FOXD4L4Q8WXT5 416 aaPredicted RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 QTRT2Q9H974 415 aaKnown RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 SNAP23O00161 211 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 RGL2O15211 777 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 ARID4AP29374 1257 aaPredicted RBP23.36■■□□□ 1.33
VRK2-205ENST00000432057 KRT32Q14532 448 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 AMIGO3Q86WK7 504 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
VRK2-205ENST00000432057 GOLGA6L22H0YM25 854 aa23.35■■□□□ 1.33
VRK2-205ENST00000432057 BRD1O95696 1058 aa23.35■■□□□ 1.33
VRK2-205ENST00000432057 HSPD1P10809 573 aaKnown RBP23.35■■□□□ 1.33
VRK2-205ENST00000432057 SLC5A1P13866 664 aa23.35■■□□□ 1.33
VRK2-205ENST00000432057 PTMSP20962 102 aa23.35■■□□□ 1.33
VRK2-205ENST00000432057 WASHC4Q2M389 1173 aa23.35■■□□□ 1.33
VRK2-205ENST00000432057 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
VRK2-205ENST00000432057 MCTP1Q6DN14 999 aa23.34■■□□□ 1.33
VRK2-205ENST00000432057 CCDC83Q8IWF9 413 aa23.34■■□□□ 1.33
VRK2-205ENST00000432057 RTCBQ9Y3I0 505 aaKnown RBP23.34■■□□□ 1.33
VRK2-205ENST00000432057 TCHHQ07283 1943 aa23.34■■□□□ 1.33
VRK2-205ENST00000432057 ME3Q16798 604 aa23.34■■□□□ 1.33
VRK2-205ENST00000432057 GZF1Q9H116 711 aaPredicted RBP23.34■■□□□ 1.33
VRK2-205ENST00000432057 SH2B1Q9NRF2 756 aaPredicted RBP23.34■■□□□ 1.33
VRK2-205ENST00000432057 TPCN1Q9ULQ1 816 aa23.34■■□□□ 1.33
VRK2-205ENST00000432057 TNRC6CQ9HCJ0 1690 aaKnown RBP23.33■■□□□ 1.33
VRK2-205ENST00000432057 UQCRFS1P1P0C7P4 283 aa23.33■■□□□ 1.33
VRK2-205ENST00000432057 ST3GAL1Q11201 340 aa23.33■■□□□ 1.33
VRK2-205ENST00000432057 APPBP2Q92624 585 aa23.33■■□□□ 1.33
VRK2-205ENST00000432057 PIH1D3Q9NQM4 214 aaKnown RBP23.33■■□□□ 1.33
VRK2-205ENST00000432057 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.33■■□□□ 1.33
VRK2-205ENST00000432057 ZPR1O75312 459 aa23.32■■□□□ 1.32
VRK2-205ENST00000432057 TOB2Q14106 344 aaPredicted RBP23.32■■□□□ 1.32
VRK2-205ENST00000432057 STOX1Q6ZVD7 989 aa23.32■■□□□ 1.32
VRK2-205ENST00000432057 NEK1Q96PY6 1258 aa23.32■■□□□ 1.32
VRK2-205ENST00000432057 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
VRK2-205ENST00000432057 A0A0G2JLW4 131 aa23.32■■□□□ 1.32
VRK2-205ENST00000432057 CHAMP1Q96JM3 812 aa23.32■■□□□ 1.32
VRK2-205ENST00000432057 CDC5LQ99459 802 aaKnown RBP23.32■■□□□ 1.32
VRK2-205ENST00000432057 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
VRK2-205ENST00000432057 CHRNDQ07001 517 aa23.31■■□□□ 1.32
VRK2-205ENST00000432057 SF3B3Q15393 1217 aaKnown RBP23.31■■□□□ 1.32
VRK2-205ENST00000432057 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.31■■□□□ 1.32
VRK2-205ENST00000432057 PUS7LQ9H0K6 701 aaKnown RBP23.31■■□□□ 1.32
VRK2-205ENST00000432057 SMC3Q9UQE7 1217 aa23.31■■□□□ 1.32
VRK2-205ENST00000432057 MYH13Q9UKX3 1938 aa23.31■■□□□ 1.32
VRK2-205ENST00000432057 ANKRD1Q15327 319 aa23.3■■□□□ 1.32
VRK2-205ENST00000432057 TTF1Q15361 905 aaPredicted RBP23.3■■□□□ 1.32
VRK2-205ENST00000432057 NECAB1Q8N987 351 aa23.3■■□□□ 1.32
VRK2-205ENST00000432057 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
VRK2-205ENST00000432057 SETDB2Q96T68 719 aa23.3■■□□□ 1.32
VRK2-205ENST00000432057 FOXP2O15409 715 aa23.3■■□□□ 1.32
VRK2-205ENST00000432057 NYXQ9GZU5 481 aa23.3■■□□□ 1.32
VRK2-205ENST00000432057 DTNBO60941 627 aa23.29■■□□□ 1.32
VRK2-205ENST00000432057 ADD2P35612 726 aa23.29■■□□□ 1.32
VRK2-205ENST00000432057 SKOR2Q2VWA4 1001 aaPredicted RBP23.29■■□□□ 1.32
VRK2-205ENST00000432057 SLC10A5Q5PT55 438 aa23.29■■□□□ 1.32
VRK2-205ENST00000432057 ZSCAN25Q6NSZ9 544 aa23.29■■□□□ 1.32
VRK2-205ENST00000432057 BCL11BQ9C0K0 894 aaPredicted RBP23.29■■□□□ 1.32
VRK2-205ENST00000432057 CHD4Q14839 1912 aa23.29■■□□□ 1.32
VRK2-205ENST00000432057 IDH1O75874 414 aaKnown RBP23.28■■□□□ 1.32
VRK2-205ENST00000432057 PHF14O94880 888 aa23.28■■□□□ 1.32
VRK2-205ENST00000432057 NBPF5PQ86XG9 351 aaPredicted RBP23.28■■□□□ 1.32
VRK2-205ENST00000432057 ANKRD18AQ8IVF6 992 aa23.28■■□□□ 1.32
VRK2-205ENST00000432057 RASGRF1Q13972 1273 aa23.28■■□□□ 1.32
VRK2-205ENST00000432057 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
VRK2-205ENST00000432057 SPATA5Q8NB90 893 aa23.28■■□□□ 1.32
VRK2-205ENST00000432057 WDR33Q9C0J8 1336 aaKnown RBP23.27■■□□□ 1.32
VRK2-205ENST00000432057 GPAA1O43292 621 aa23.27■■□□□ 1.32
VRK2-205ENST00000432057 GJB2P29033 226 aa23.27■■□□□ 1.32
VRK2-205ENST00000432057 SLC9C2Q5TAH2 1124 aa23.27■■□□□ 1.32
VRK2-205ENST00000432057 ZNF772Q68DY9 489 aaPredicted RBP23.27■■□□□ 1.32
VRK2-205ENST00000432057 LRRC4BQ9NT99 713 aa23.27■■□□□ 1.32
VRK2-205ENST00000432057 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
VRK2-205ENST00000432057 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
VRK2-205ENST00000432057 Q6ZUG5 572 aa23.26■■□□□ 1.31
VRK2-205ENST00000432057 LMBRD1Q9NUN5 540 aa23.26■■□□□ 1.31
VRK2-205ENST00000432057 E7EWF7 191 aa23.26■■□□□ 1.31
VRK2-205ENST00000432057 BCAMP50895 628 aa23.26■■□□□ 1.31
VRK2-205ENST00000432057 CCDC24Q8N4L8 307 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms