RNA–Protein interactions for RNA: ENST00000431927.5

TTC39A-210, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-210ENST00000431927 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 IGHDP01880 384 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
TTC39A-210ENST00000431927 HLFQ16534 295 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 SLC10A5Q5PT55 438 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
TTC39A-210ENST00000431927 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 TRPM4Q8TD43 1214 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
TTC39A-210ENST00000431927 CEP290O15078 2479 aa12.99□□□□□ -0.33
TTC39A-210ENST00000431927 HTTP42858 3142 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
TTC39A-210ENST00000431927 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
TTC39A-210ENST00000431927 TRPA1O75762 1119 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 CSF1RP07333 972 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 RNF186Q9NXI6 227 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
TTC39A-210ENST00000431927 LRRFIP2Q9Y608 721 aaKnown RBP12.98□□□□□ -0.33
TTC39A-210ENST00000431927 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 KIF23Q02241 960 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-210ENST00000431927 RGMBQ6NW40 437 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 DLK2Q6UY11 383 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
TTC39A-210ENST00000431927 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
TTC39A-210ENST00000431927 NUCB1Q02818 461 aa12.96□□□□□ -0.33
TTC39A-210ENST00000431927 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
TTC39A-210ENST00000431927 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
TTC39A-210ENST00000431927 VPS33BQ9H267 617 aa12.96□□□□□ -0.33
TTC39A-210ENST00000431927 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
TTC39A-210ENST00000431927 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 DLL1O00548 723 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 PDE8AO60658 829 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 CCDC102AQ96A19 550 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
TTC39A-210ENST00000431927 GBA2Q9HCG7 927 aaPredicted RBP12.95□□□□□ -0.34
TTC39A-210ENST00000431927 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
TTC39A-210ENST00000431927 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 RAD17O75943 681 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 FOXO4P98177 505 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 PKN2Q16513 984 aaKnown RBP12.94□□□□□ -0.34
TTC39A-210ENST00000431927 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 SUCLG2Q96I99 432 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
TTC39A-210ENST00000431927 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
TTC39A-210ENST00000431927 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
TTC39A-210ENST00000431927 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 SLC10A3P09131 477 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 ZNF157P51786 506 aaPredicted RBP12.93□□□□□ -0.34
TTC39A-210ENST00000431927 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 CSRNP1Q96S65 589 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 BICC1Q9H694 974 aaKnown RBP12.93□□□□□ -0.34
TTC39A-210ENST00000431927 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
TTC39A-210ENST00000431927 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
TTC39A-210ENST00000431927 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 LAMB2P55268 1798 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
TTC39A-210ENST00000431927 PNMA6EA0A0J9YXQ4 647 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
TTC39A-210ENST00000431927 NTSR2O95665 410 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 KIAA2012Q0VF49 1180 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 TNIP1Q15025 636 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
TTC39A-210ENST00000431927 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 CENPFP49454 3210 aa12.92□□□□□ -0.34
TTC39A-210ENST00000431927 KIAA0100Q14667 2235 aaKnown RBP12.91□□□□□ -0.34
TTC39A-210ENST00000431927 H7C1D1 291 aa12.91□□□□□ -0.34
TTC39A-210ENST00000431927 CIAO1O76071 339 aa12.91□□□□□ -0.34
TTC39A-210ENST00000431927 GPTP24298 496 aa12.91□□□□□ -0.34
TTC39A-210ENST00000431927 RFX5P48382 616 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-210ENST00000431927 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-210ENST00000431927 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
TTC39A-210ENST00000431927 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.34
TTC39A-210ENST00000431927 COL6A3P12111 3177 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 ADM5C9JUS6 153 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
TTC39A-210ENST00000431927 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-210ENST00000431927 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 OSBPL3Q9H4L5 887 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 GPR108Q9NPR9 543 aa12.9□□□□□ -0.34
TTC39A-210ENST00000431927 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
TTC39A-210ENST00000431927 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
TTC39A-210ENST00000431927 EGFRP00533 1210 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms