RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NASPP49321 788 aaPredicted RBP16.59■□□□□ 0.25
HOXC4-202ENST00000430889 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 DTNBO60941 627 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 HMGB1P09429 215 aaKnown RBP16.59■□□□□ 0.25
HOXC4-202ENST00000430889 ZAP70P43403 619 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
HOXC4-202ENST00000430889 ITPK1Q13572 414 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 METTL24Q5JXM2 366 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 Q6ZUG5 572 aa16.59■□□□□ 0.25
HOXC4-202ENST00000430889 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
HOXC4-202ENST00000430889 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
HOXC4-202ENST00000430889 A0A0G2JLW4 131 aa16.58■□□□□ 0.24
HOXC4-202ENST00000430889 FGFR2P21802 821 aa16.58■□□□□ 0.24
HOXC4-202ENST00000430889 SIK1P57059 783 aa16.58■□□□□ 0.24
HOXC4-202ENST00000430889 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
HOXC4-202ENST00000430889 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
HOXC4-202ENST00000430889 DHX32Q7L7V1 743 aaKnown RBP16.58■□□□□ 0.24
HOXC4-202ENST00000430889 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
HOXC4-202ENST00000430889 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 SYCE3A1L190 88 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 PDCP20941 246 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 MCAMP43121 646 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 UBE2HP62256 183 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
HOXC4-202ENST00000430889 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
HOXC4-202ENST00000430889 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
HOXC4-202ENST00000430889 RRAGDQ9NQL2 400 aaPredicted RBP16.57■□□□□ 0.24
HOXC4-202ENST00000430889 E7EWF7 191 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 PFKFB2O60825 505 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 PDE8BO95263 885 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
HOXC4-202ENST00000430889 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
HOXC4-202ENST00000430889 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 APPBP2Q92624 585 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 DNM1Q05193 864 aaKnown RBP16.56■□□□□ 0.24
HOXC4-202ENST00000430889 CCDC173Q0VFZ6 552 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
HOXC4-202ENST00000430889 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
HOXC4-202ENST00000430889 SCN7AQ01118 1682 aa16.55■□□□□ 0.24
HOXC4-202ENST00000430889 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
HOXC4-202ENST00000430889 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
HOXC4-202ENST00000430889 COL4A1P02462 1669 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
HOXC4-202ENST00000430889 NTSR2O95665 410 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 EVCP57679 992 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 SCRN1Q12765 414 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 PARP10Q53GL7 1025 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 BRF1Q92994 677 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
HOXC4-202ENST00000430889 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 BCL9LQ86UU0 1499 aa16.54■□□□□ 0.24
HOXC4-202ENST00000430889 JAK2O60674 1132 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 ADD2P35612 726 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 STK3Q13188 491 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 PDLIM2Q96JY6 352 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
HOXC4-202ENST00000430889 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
HOXC4-202ENST00000430889 ELP1O95163 1332 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 PUM3Q15397 648 aaKnown RBP16.53■□□□□ 0.24
HOXC4-202ENST00000430889 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 CCDC183Q5T5S1 534 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
HOXC4-202ENST00000430889 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
HOXC4-202ENST00000430889 FIBPO43427 364 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 CTDNEP1O95476 244 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 PHKA1P46020 1223 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 CCDC102BQ68D86 513 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.23
HOXC4-202ENST00000430889 LPIN2Q92539 896 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 PIH1D3Q9NQM4 214 aaKnown RBP16.52■□□□□ 0.23
HOXC4-202ENST00000430889 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.23
HOXC4-202ENST00000430889 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 PHF14O94880 888 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 FGAP02671 866 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
HOXC4-202ENST00000430889 RESTQ13127 1097 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 TTF1Q15361 905 aaPredicted RBP16.51■□□□□ 0.23
HOXC4-202ENST00000430889 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 CHD4Q14839 1912 aa16.51■□□□□ 0.23
HOXC4-202ENST00000430889 NUTM2BA6NNL0 878 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-202ENST00000430889 NUTM2EB1AL46 878 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-202ENST00000430889 GPAA1O43292 621 aa16.5■□□□□ 0.23
HOXC4-202ENST00000430889 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
HOXC4-202ENST00000430889 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
HOXC4-202ENST00000430889 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
HOXC4-202ENST00000430889 NUTM2AQ8IVF1 878 aaPredicted RBP16.5■□□□□ 0.23
HOXC4-202ENST00000430889 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms