RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ZBED9Q6R2W3 1325 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 KDM5BQ9UGL1 1544 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 NCOA1Q15788 1441 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 MCM2P49736 904 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 DCTN1Q14203 1278 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 CCAR2Q8N163 923 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 GTF3C2Q8WUA4 911 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 MASTLQ96GX5 879 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ADPGKQ9BRR6 497 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 NEO1Q92859 1461 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ABCA10Q8WWZ4 1543 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 TNPO2O14787 897 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 BBOX1O75936 387 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC175P0C221 793 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 LMAN1P49257 510 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SFSWAPQ12872 951 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 NSMFQ6X4W1 530 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 GLG1Q92896 1179 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 HMGB1P1B2RPK0 211 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 FERP16591 822 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SMTNP53814 917 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 YARSP54577 528 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 INF2Q27J81 1249 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 KRT26Q7Z3Y9 468 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 GAS2L1Q99501 681 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ANGEL1Q9UNK9 670 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 YTHDC2Q9H6S0 1430 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ABCC2Q92887 1545 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ERVV-2B6SEH9 535 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 CDC45O75419 566 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 MAP2K1Q02750 393 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 STRN3Q13033 797 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 PPP2R5DQ14738 602 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 RABEP1Q15276 862 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 TAF1CQ15572 869 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 CAGE1Q8TC20 777 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 RIOK1Q9BRS2 568 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ACBD3Q9H3P7 528 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SH3BP5O60239 455 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SERPINB2P05120 415 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SSTR3P32745 418 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 SSRP1Q08945 709 aaKnown RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF397Q8NF99 534 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 KIAA1524Q8TCG1 905 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 IP6K1Q92551 441 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 HAUS7Q99871 368 aa5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF215Q9UL58 517 aaPredicted RBP5.17□□□□□ -1.58
LRRK2-204ENST00000430804 ZFYVE16Q7Z3T8 1539 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 KCNQ2O43526 872 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 IL15P40933 162 aaPredicted RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 FAM160B1Q5W0V3 765 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 MCM9Q9NXL9 1143 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 BLOC1S2Q6QNY1 142 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 UBE3BQ7Z3V4 1068 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 TTC30AQ86WT1 665 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 OTUD6BQ8N6M0 293 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 FAM212AQ96EL1 285 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 MSRAQ9UJ68 235 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 ZHX1Q9UKY1 873 aaPredicted RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 KDM6BO15054 1643 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 P4HA1P13674 534 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 KIF11P52732 1056 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 ATXN3P54252 364 aaPredicted RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 SP4Q02446 784 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 FKBP15Q5T1M5 1219 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 MCTP2Q6DN12 878 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 COPS6Q7L5N1 327 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 METTL23Q86XA0 190 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 NKX2-3Q8TAU0 364 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 TPCN1Q9ULQ1 816 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 URB2Q14146 1524 aaKnown RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 NSD2O96028 1365 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 F8W8V4 182 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 NDC80O14777 642 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 PDE8AO60658 829 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 HUNKP57058 714 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 TRPC6Q9Y210 931 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 OATP04181 439 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 MMP10P09238 476 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC91Q7Z6B0 441 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 PARK7Q99497 189 aaKnown RBP5.16□□□□□ -1.58
LRRK2-204ENST00000430804 AAASQ9NRG9 546 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 EXOC7Q9UPT5 735 aa5.16□□□□□ -1.58
LRRK2-204ENST00000430804 PIK3R4Q99570 1358 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 FCGRTP55899 365 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 MAPK8IP2Q13387 824 aaPredicted RBP5.15□□□□□ -1.58
LRRK2-204ENST00000430804 AEBP1Q8IUX7 1158 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC89Q8N998 374 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 TAF4BQ92750 862 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 NOX5Q96PH1 765 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 DPP7Q9UHL4 492 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 KIAA1107Q9UPP5 1409 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 GOLGA8AA7E2F4 631 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 GOLGA8BA8MQT2 603 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 MTFR1LQ9H019 292 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 SLITRK6Q9H5Y7 841 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 MAP3K2Q9Y2U5 619 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 SLC4A4Q9Y6R1 1079 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms