RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 HDAC5Q9UQL6 1122 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 TLL2Q9Y6L7 1015 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 WDR33Q9C0J8 1336 aaKnown RBP11.51□□□□□ -0.57
HDAC9-211ENST00000430454 ZNF609O15014 1411 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 MAP2K2P36507 400 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-211ENST00000430454 ZNF280AP59817 542 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-211ENST00000430454 CHRNDQ07001 517 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 LDHAL6AQ6ZMR3 332 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 ZNF804AQ7Z570 1209 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 USP48Q86UV5 1035 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 CAPNS2Q96L46 248 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 ZNF408Q9H9D4 720 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 KCNQ5Q9NR82 932 aa11.5□□□□□ -0.57
HDAC9-211ENST00000430454 PCNTO95613 3336 aa11.49□□□□□ -0.57
HDAC9-211ENST00000430454 FOXO4P98177 505 aa11.49□□□□□ -0.57
HDAC9-211ENST00000430454 CST9Q5W186 159 aa11.49□□□□□ -0.57
HDAC9-211ENST00000430454 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
HDAC9-211ENST00000430454 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
HDAC9-211ENST00000430454 MYOZ2Q9NPC6 264 aa11.49□□□□□ -0.57
HDAC9-211ENST00000430454 CA12O43570 354 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 GRM1Q13255 1194 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 SCARF1Q14162 830 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
HDAC9-211ENST00000430454 SAPCD2Q86UD0 394 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 CCDC102AQ96A19 550 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 PRDM10Q9NQV6 1147 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 SMC4Q9NTJ3 1288 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 PITPNM2Q9BZ72 1349 aa11.48□□□□□ -0.57
HDAC9-211ENST00000430454 TRPM7Q96QT4 1865 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 MROH5Q6ZUA9 1318 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 SHTN1A0MZ66 631 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 NF2P35240 595 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 DACT2Q5SW24 774 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 GBA2Q9HCG7 927 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-211ENST00000430454 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
HDAC9-211ENST00000430454 UTYO14607 1347 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 HUNKP57058 714 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 FKBP1BP68106 108 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 NOGQ13253 232 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-211ENST00000430454 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.57
HDAC9-211ENST00000430454 CYP4F22Q6NT55 531 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-211ENST00000430454 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 GMLQ99445 158 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 API5Q9BZZ5 524 aaKnown RBP11.46□□□□□ -0.57
HDAC9-211ENST00000430454 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
HDAC9-211ENST00000430454 COL4A1P02462 1669 aa11.46□□□□□ -0.58
HDAC9-211ENST00000430454 FOXN1O15353 648 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 MYO1BO43795 1136 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 PLIN1O60240 522 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 TAF5LO75529 589 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 FKBP1AP62942 108 aaKnown RBP11.45□□□□□ -0.58
HDAC9-211ENST00000430454 GTF2IP78347 998 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 UBE4AQ14139 1066 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
HDAC9-211ENST00000430454 ADM5C9JUS6 153 aa11.44□□□□□ -0.58
HDAC9-211ENST00000430454 EGFRP00533 1210 aa11.44□□□□□ -0.58
HDAC9-211ENST00000430454 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
HDAC9-211ENST00000430454 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
HDAC9-211ENST00000430454 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDAC9-211ENST00000430454 RGMBQ6NW40 437 aa11.44□□□□□ -0.58
HDAC9-211ENST00000430454 APOBEC3FQ8IUX4 373 aaKnown RBP11.44□□□□□ -0.58
HDAC9-211ENST00000430454 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
HDAC9-211ENST00000430454 CDCA5Q96FF9 252 aa11.44□□□□□ -0.58
HDAC9-211ENST00000430454 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
HDAC9-211ENST00000430454 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 SASH1O94885 1247 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 IL1R1P14778 569 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 HIBADHP31937 336 aaKnown RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 ZNF157P51786 506 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 DLGAP5Q15398 846 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 METTL24Q5JXM2 366 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 TXNRD3Q86VQ6 643 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
HDAC9-211ENST00000430454 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 BICC1Q9H694 974 aaKnown RBP11.43□□□□□ -0.58
HDAC9-211ENST00000430454 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
HDAC9-211ENST00000430454 FRAT2O75474 233 aaPredicted RBP11.42□□□□□ -0.58
HDAC9-211ENST00000430454 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
HDAC9-211ENST00000430454 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
HDAC9-211ENST00000430454 CDCA7LQ96GN5 454 aa11.42□□□□□ -0.58
HDAC9-211ENST00000430454 PSME4Q14997 1843 aa11.42□□□□□ -0.58
HDAC9-211ENST00000430454 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
HDAC9-211ENST00000430454 WTIPA6NIX2 430 aaPredicted RBP11.41□□□□□ -0.58
HDAC9-211ENST00000430454 WNT10BO00744 389 aa11.41□□□□□ -0.58
HDAC9-211ENST00000430454 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
HDAC9-211ENST00000430454 KLRK1P26718 216 aa11.41□□□□□ -0.58
HDAC9-211ENST00000430454 LBX1P52954 281 aa11.41□□□□□ -0.58
HDAC9-211ENST00000430454 NBPF9Q3BBW0 867 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms