RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TNS4Q8IZW8 715 aa15.04■□□□□ -0
HDAC4-202ENST00000430200 KAZALD1Q96I82 304 aa15.04■□□□□ -0
HDAC4-202ENST00000430200 ZIC5Q96T25 663 aa15.04■□□□□ -0
HDAC4-202ENST00000430200 DACT2Q5SW24 774 aa15.03■□□□□ -0
HDAC4-202ENST00000430200 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
HDAC4-202ENST00000430200 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
HDAC4-202ENST00000430200 CAPN15O75808 1086 aa15.02■□□□□ -0
HDAC4-202ENST00000430200 CHRNDQ07001 517 aa15.02■□□□□ -0
HDAC4-202ENST00000430200 CDC37L1Q7L3B6 337 aa15.02■□□□□ -0
HDAC4-202ENST00000430200 KRT26Q7Z3Y9 468 aa15.02■□□□□ -0
HDAC4-202ENST00000430200 ZNF594Q96JF6 807 aaPredicted RBP15.02■□□□□ -0
HDAC4-202ENST00000430200 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
HDAC4-202ENST00000430200 GRM8O00222 908 aa15.01□□□□□ -0.01
HDAC4-202ENST00000430200 LBX1P52954 281 aa15.01□□□□□ -0.01
HDAC4-202ENST00000430200 HELBQ8NG08 1087 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-202ENST00000430200 CDCA7LQ96GN5 454 aa15.01□□□□□ -0.01
HDAC4-202ENST00000430200 TSKSQ9UJT2 592 aa15.01□□□□□ -0.01
HDAC4-202ENST00000430200 USP17L3A6NCW0 530 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 USP17L4A6NCW7 530 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 TAF5LO75529 589 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 IGHMBP2P38935 993 aaKnown RBP15□□□□□ -0.01
HDAC4-202ENST00000430200 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
HDAC4-202ENST00000430200 LMBR1LQ6UX01 489 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 MRPL50Q8N5N7 158 aaKnown RBP15□□□□□ -0.01
HDAC4-202ENST00000430200 AGBL3Q8NEM8 1001 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 SUCLG2Q96I99 432 aa15□□□□□ -0.01
HDAC4-202ENST00000430200 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 AOX1Q06278 1338 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 FAM155AB1AL88 458 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-202ENST00000430200 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-202ENST00000430200 NBPF9Q3BBW0 867 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 PODNQ7Z5L7 613 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 CERS5Q8N5B7 392 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 CDCA5Q96FF9 252 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 MYOZ2Q9NPC6 264 aa14.99□□□□□ -0.01
HDAC4-202ENST00000430200 G3V3G9 751 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 SASH1O94885 1247 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-202ENST00000430200 SCARF1Q14162 830 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 SSH1Q8WYL5 1049 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 PRDM10Q9NQV6 1147 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 PCDHAC2Q9Y5I4 1007 aa14.98□□□□□ -0.01
HDAC4-202ENST00000430200 HTTP42858 3142 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 UTYO14607 1347 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 ANKRD18BA2A2Z9 1011 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 HUNKP57058 714 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 MOB2Q70IA6 237 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 FBXW7Q969H0 707 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 AIDAQ96BJ3 306 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 HHIPL1Q96JK4 782 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 MPHOSPH8Q99549 860 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 PUS3Q9BZE2 481 aaKnown RBP14.97□□□□□ -0.01
HDAC4-202ENST00000430200 COA1Q9GZY4 146 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
HDAC4-202ENST00000430200 TNRC18O15417 2968 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-202ENST00000430200 ALDH1L1O75891 902 aa14.96□□□□□ -0.01
HDAC4-202ENST00000430200 ECE1P42892 770 aa14.96□□□□□ -0.01
HDAC4-202ENST00000430200 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.01
HDAC4-202ENST00000430200 DCPSQ96C86 337 aaKnown RBP14.96□□□□□ -0.01
HDAC4-202ENST00000430200 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
HDAC4-202ENST00000430200 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-202ENST00000430200 JAG2Q9Y219 1238 aa14.96□□□□□ -0.01
HDAC4-202ENST00000430200 WNT10BO00744 389 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 GTF2IP78347 998 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 MAP2K1Q02750 393 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-202ENST00000430200 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
HDAC4-202ENST00000430200 STRIP1Q5VSL9 837 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 ZBED3Q96IU2 234 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-202ENST00000430200 ANKRD2Q9GZV1 360 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
HDAC4-202ENST00000430200 CD209Q9NNX6 404 aa14.95□□□□□ -0.02
HDAC4-202ENST00000430200 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
HDAC4-202ENST00000430200 E9PSI1 815 aa14.94□□□□□ -0.02
HDAC4-202ENST00000430200 C15orf52Q6ZUT6 534 aaKnown RBP14.94□□□□□ -0.02
HDAC4-202ENST00000430200 SULF1Q8IWU6 871 aa14.94□□□□□ -0.02
HDAC4-202ENST00000430200 TRMT2AQ8IZ69 625 aaKnown RBP14.94□□□□□ -0.02
HDAC4-202ENST00000430200 MAP2K2P36507 400 aa14.93□□□□□ -0.02
HDAC4-202ENST00000430200 BRPF1P55201 1214 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-202ENST00000430200 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-202ENST00000430200 C9orf78Q9NZ63 289 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-202ENST00000430200 COL1A1P02452 1464 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-202ENST00000430200 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 SLC10A3P09131 477 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 KCNJ4P48050 445 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 RGMBQ6NW40 437 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 RASAL3Q86YV0 1011 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 KLHDC4Q8TBB5 520 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 FZD1Q9UP38 647 aa14.92□□□□□ -0.02
HDAC4-202ENST00000430200 PLIN1O60240 522 aa14.91□□□□□ -0.02
HDAC4-202ENST00000430200 IL1R1P14778 569 aa14.91□□□□□ -0.02
HDAC4-202ENST00000430200 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms