RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 ABHD8Q96I13 439 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 MYO3BQ8WXR4 1341 aa19.02■□□□□ 0.64
MSH5-208ENST00000429846 PAPPA2Q9BXP8 1791 aa19.02■□□□□ 0.64
MSH5-208ENST00000429846 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
MSH5-208ENST00000429846 MYOZ2Q9NPC6 264 aa19.02■□□□□ 0.64
MSH5-208ENST00000429846 LEMD3Q9Y2U8 911 aa19.02■□□□□ 0.64
MSH5-208ENST00000429846 ITGA6P23229 1130 aa19.01■□□□□ 0.63
MSH5-208ENST00000429846 SCARF1Q14162 830 aa19.01■□□□□ 0.63
MSH5-208ENST00000429846 ANGEL2Q5VTE6 544 aaKnown RBP19.01■□□□□ 0.63
MSH5-208ENST00000429846 COA1Q9GZY4 146 aa19.01■□□□□ 0.63
MSH5-208ENST00000429846 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
MSH5-208ENST00000429846 FAM155AB1AL88 458 aaPredicted RBP19■□□□□ 0.63
MSH5-208ENST00000429846 MMP14P50281 582 aa19■□□□□ 0.63
MSH5-208ENST00000429846 CASP7P55210 303 aa19■□□□□ 0.63
MSH5-208ENST00000429846 FKBP1BP68106 108 aa19■□□□□ 0.63
MSH5-208ENST00000429846 CDCA5Q96FF9 252 aa19■□□□□ 0.63
MSH5-208ENST00000429846 MPHOSPH8Q99549 860 aa19■□□□□ 0.63
MSH5-208ENST00000429846 ANKRD2Q9GZV1 360 aa19■□□□□ 0.63
MSH5-208ENST00000429846 AKAP11Q9UKA4 1901 aa19■□□□□ 0.63
MSH5-208ENST00000429846 CASP8AP2Q9UKL3 1982 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 VAMP4O75379 141 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 CSF1RP07333 972 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 FAM161AQ3B820 660 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 SAGE1Q9NXZ1 904 aa18.99■□□□□ 0.63
MSH5-208ENST00000429846 ASTN2O75129 1339 aaPredicted RBP18.99■□□□□ 0.63
MSH5-208ENST00000429846 A0A1B0GUL6 1792 aa18.98■□□□□ 0.63
MSH5-208ENST00000429846 ZNF157P51786 506 aaPredicted RBP18.98■□□□□ 0.63
MSH5-208ENST00000429846 DACT2Q5SW24 774 aa18.98■□□□□ 0.63
MSH5-208ENST00000429846 ZNF804BA4D1E1 1349 aa18.98■□□□□ 0.63
MSH5-208ENST00000429846 SLC10A3P09131 477 aa18.97■□□□□ 0.63
MSH5-208ENST00000429846 ZIC5Q96T25 663 aa18.97■□□□□ 0.63
MSH5-208ENST00000429846 ANKRD18BA2A2Z9 1011 aa18.96■□□□□ 0.63
MSH5-208ENST00000429846 WTIPA6NIX2 430 aaPredicted RBP18.96■□□□□ 0.63
MSH5-208ENST00000429846 EXOSC9Q06265 439 aaKnown RBP18.96■□□□□ 0.63
MSH5-208ENST00000429846 REM2Q8IYK8 340 aaPredicted RBP18.96■□□□□ 0.63
MSH5-208ENST00000429846 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
MSH5-208ENST00000429846 TXNRD3Q86VQ6 643 aa18.95■□□□□ 0.62
MSH5-208ENST00000429846 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
MSH5-208ENST00000429846 KCNJ4P48050 445 aa18.94■□□□□ 0.62
MSH5-208ENST00000429846 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
MSH5-208ENST00000429846 CHRNDQ07001 517 aa18.94■□□□□ 0.62
MSH5-208ENST00000429846 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
MSH5-208ENST00000429846 WNT10BO00744 389 aa18.93■□□□□ 0.62
MSH5-208ENST00000429846 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
MSH5-208ENST00000429846 BEND3Q5T5X7 828 aa18.93■□□□□ 0.62
MSH5-208ENST00000429846 TTLL5Q6EMB2 1281 aa18.93■□□□□ 0.62
MSH5-208ENST00000429846 HDAC9Q9UKV0 1011 aa18.93■□□□□ 0.62
MSH5-208ENST00000429846 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
MSH5-208ENST00000429846 NF2P35240 595 aa18.92■□□□□ 0.62
MSH5-208ENST00000429846 NBPF9Q3BBW0 867 aa18.92■□□□□ 0.62
MSH5-208ENST00000429846 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
MSH5-208ENST00000429846 RASAL3Q86YV0 1011 aa18.92■□□□□ 0.62
MSH5-208ENST00000429846 MCOLN1Q9GZU1 580 aa18.92■□□□□ 0.62
MSH5-208ENST00000429846 COL1A1P02452 1464 aaPredicted RBP18.91■□□□□ 0.62
MSH5-208ENST00000429846 F6X3S4 739 aa18.91■□□□□ 0.62
MSH5-208ENST00000429846 KLRK1P26718 216 aa18.91■□□□□ 0.62
MSH5-208ENST00000429846 FOXO4P98177 505 aa18.91■□□□□ 0.62
MSH5-208ENST00000429846 MXD3Q9BW11 206 aa18.91■□□□□ 0.62
MSH5-208ENST00000429846 CCDC85CA6NKD9 419 aa18.9■□□□□ 0.62
MSH5-208ENST00000429846 APOBEC3FQ8IUX4 373 aaKnown RBP18.9■□□□□ 0.62
MSH5-208ENST00000429846 CD209Q9NNX6 404 aa18.9■□□□□ 0.62
MSH5-208ENST00000429846 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
MSH5-208ENST00000429846 RNF186Q9NXI6 227 aa18.9■□□□□ 0.62
MSH5-208ENST00000429846 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
MSH5-208ENST00000429846 IRS2Q9Y4H2 1338 aa18.9■□□□□ 0.62
MSH5-208ENST00000429846 GRM8O00222 908 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 GTF2IP78347 998 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 DGKZQ13574 1117 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 ZNF804AQ7Z570 1209 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
MSH5-208ENST00000429846 TRPA1O75762 1119 aa18.88■□□□□ 0.61
MSH5-208ENST00000429846 ALDH1L1O75891 902 aa18.88■□□□□ 0.61
MSH5-208ENST00000429846 SASH1O94885 1247 aa18.88■□□□□ 0.61
MSH5-208ENST00000429846 CCDC57Q2TAC2 916 aa18.88■□□□□ 0.61
MSH5-208ENST00000429846 FKBP1AP62942 108 aaKnown RBP18.87■□□□□ 0.61
MSH5-208ENST00000429846 LMBR1LQ6UX01 489 aa18.87■□□□□ 0.61
MSH5-208ENST00000429846 ZBED3Q96IU2 234 aaPredicted RBP18.87■□□□□ 0.61
MSH5-208ENST00000429846 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
MSH5-208ENST00000429846 SCAF8Q9UPN6 1271 aaKnown RBP18.87■□□□□ 0.61
MSH5-208ENST00000429846 TAF5LO75529 589 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 IL1R1P14778 569 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 RGS19P49795 217 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 TTLL12Q14166 644 aaPredicted RBP18.86■□□□□ 0.61
MSH5-208ENST00000429846 TAF7LQ5H9L4 462 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 SRCIN1Q9C0H9 1055 aa18.86■□□□□ 0.61
MSH5-208ENST00000429846 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
MSH5-208ENST00000429846 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
MSH5-208ENST00000429846 MOB2Q70IA6 237 aa18.85■□□□□ 0.61
MSH5-208ENST00000429846 MTMR14Q8NCE2 650 aa18.85■□□□□ 0.61
MSH5-208ENST00000429846 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
MSH5-208ENST00000429846 ARAP2Q8WZ64 1704 aa18.85■□□□□ 0.61
MSH5-208ENST00000429846 ZNF521Q96K83 1311 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 UBE2Q2LH0YL09 131 aa18.84■□□□□ 0.61
MSH5-208ENST00000429846 SNAP23O00161 211 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms