RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TOP1P11387 765 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 TRIM4Q9C037 500 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 NRDE2Q9H7Z3 1164 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 CCDC181Q5TID7 509 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 CXorf56Q9H5V9 222 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 GNL3LQ9NVN8 582 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 CYP2C19P33261 490 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 MSL3Q8N5Y2 521 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 TSGA10Q9BZW7 698 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 STK38Q15208 465 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 SMARCC2Q8TAQ2 1214 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 SLC52A1Q9NWF4 448 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 PPFIBP2Q8ND30 876 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 ATP5DP30049 168 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 ANKRD7Q92527 254 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 PRDM15P57071 1507 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 SECISBP2LQ93073 1101 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 MIS18AQ9NYP9 233 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 NOS1P29475 1434 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 CNGA4Q8IV77 575 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 DEUP1Q05D60 604 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 PPP2R5AQ15172 486 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 DAAM2Q86T65 1068 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 ABTB2Q8N961 1025 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 A2MP01023 1474 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 AACSQ86V21 672 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 IQGAP3Q86VI3 1631 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 MACROD2A1Z1Q3 448 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 THUMPD2Q9BTF0 503 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 SAMD15Q9P1V8 674 aa8.54□□□□□ -1.04
SYNPO2-202ENST00000429713 USO1O60763 962 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 FBXO18Q8NFZ0 1043 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 LRRD1A4D1F6 860 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 NDUFAB1O14561 156 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 BMP15O95972 392 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 PODNQ7Z5L7 613 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 RAB3IPQ96QF0 476 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 UIMC1Q96RL1 719 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 STX6O43752 255 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 MARCH6O60337 910 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 CCDC51Q96ER9 411 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 VIPAS39Q9H9C1 493 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 DZIP1Q86YF9 867 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 TRIM7Q9C029 511 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 IL1RAPL2Q9NP60 686 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 NDC80O14777 642 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 VPS36Q86VN1 386 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 FANCAO15360 1455 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 TTC37Q6PGP7 1564 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 CCDC110Q8TBZ0 833 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 ATP10BO94823 1461 aa8.53□□□□□ -1.04
SYNPO2-202ENST00000429713 CCAR1Q8IX12 1150 aaKnown RBP8.52□□□□□ -1.04
SYNPO2-202ENST00000429713 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.04
SYNPO2-202ENST00000429713 FGFR1OPO95684 399 aaKnown RBP8.52□□□□□ -1.04
SYNPO2-202ENST00000429713 TMEM87AQ8NBN3 555 aa8.52□□□□□ -1.04
SYNPO2-202ENST00000429713 SIL1Q9H173 461 aa8.52□□□□□ -1.04
SYNPO2-202ENST00000429713 MAPK8IP2Q13387 824 aaPredicted RBP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 SPECC1Q5M775 1068 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 SMC1BQ8NDV3 1235 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 EIF2S1P05198 315 aaKnown RBP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GCFC2P16383 781 aaKnown RBP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 MAP3K21Q5TCX8 1036 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 JAKMIP2Q96AA8 810 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 A1CFQ9NQ94 594 aaKnown RBP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC152Q4G0S7 254 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 ABLIM1O14639 778 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 WASF1Q92558 559 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GOLGA6CA6NDK9 693 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 YEATS4O95619 227 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GOLGA6DP0CG33 693 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 HOOK2Q96ED9 719 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 GOLGA6AQ9NYA3 693 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 CTNNA3Q9UI47 895 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 ADGRF5Q8IZF2 1346 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 MCM10Q7L590 875 aa8.52□□□□□ -1.05
SYNPO2-202ENST00000429713 VGLL3A8MV65 326 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 SDSP20132 328 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms