RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
GARNL3-204ENST00000429629 TFCP2Q12800 502 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 TNIP1Q15025 636 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 ZNF804AQ7Z570 1209 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 TXNRD3Q86VQ6 643 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 GPC2Q8N158 579 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 FAM84BQ96KN1 310 aaPredicted RBP18.47■□□□□ 0.55
GARNL3-204ENST00000429629 TAF1P21675 1872 aa18.47■□□□□ 0.55
GARNL3-204ENST00000429629 SNAP23O00161 211 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 ECE2O60344 883 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 YY1P25490 414 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 CXCL9Q07325 125 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 OS9Q13438 667 aaPredicted RBP18.46■□□□□ 0.55
GARNL3-204ENST00000429629 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 CD209Q9NNX6 404 aa18.46■□□□□ 0.55
GARNL3-204ENST00000429629 MMP14P50281 582 aa18.45■□□□□ 0.54
GARNL3-204ENST00000429629 DOK7Q18PE1 504 aa18.45■□□□□ 0.54
GARNL3-204ENST00000429629 TDRD7Q8NHU6 1098 aaKnown RBP18.45■□□□□ 0.54
GARNL3-204ENST00000429629 GPR101Q96P66 508 aaPredicted RBP18.45■□□□□ 0.54
GARNL3-204ENST00000429629 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
GARNL3-204ENST00000429629 YDJCA8MPS7 323 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 VIL1P09327 827 aaKnown RBP18.44■□□□□ 0.54
GARNL3-204ENST00000429629 STRIP1Q5VSL9 837 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 CIAPIN1Q6FI81 312 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
GARNL3-204ENST00000429629 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 EXOC6BQ9Y2D4 811 aa18.44■□□□□ 0.54
GARNL3-204ENST00000429629 A0A1B0GUL7 405 aa18.43■□□□□ 0.54
GARNL3-204ENST00000429629 KLRK1P26718 216 aa18.43■□□□□ 0.54
GARNL3-204ENST00000429629 TIMM10P62072 90 aa18.43■□□□□ 0.54
GARNL3-204ENST00000429629 FKBP1AP62942 108 aaKnown RBP18.43■□□□□ 0.54
GARNL3-204ENST00000429629 DPF2Q92785 391 aa18.43■□□□□ 0.54
GARNL3-204ENST00000429629 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
GARNL3-204ENST00000429629 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 SEMA3EO15041 775 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 RPS12P25398 132 aaKnown RBP18.42■□□□□ 0.54
GARNL3-204ENST00000429629 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 VPS37DQ86XT2 251 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
GARNL3-204ENST00000429629 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
GARNL3-204ENST00000429629 COL4A5P29400 1685 aa18.41■□□□□ 0.54
GARNL3-204ENST00000429629 GYG1P46976 350 aa18.41■□□□□ 0.54
GARNL3-204ENST00000429629 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
GARNL3-204ENST00000429629 XAGE2Q96GT9 111 aa18.41■□□□□ 0.54
GARNL3-204ENST00000429629 ZNF512BQ96KM6 892 aaPredicted RBP18.41■□□□□ 0.54
GARNL3-204ENST00000429629 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
GARNL3-204ENST00000429629 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
GARNL3-204ENST00000429629 ZNF609O15014 1411 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
GARNL3-204ENST00000429629 BCAMP50895 628 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 AGBL3Q8NEM8 1001 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.4■□□□□ 0.54
GARNL3-204ENST00000429629 MYO3BQ8WXR4 1341 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
GARNL3-204ENST00000429629 SBF1O95248 1867 aa18.39■□□□□ 0.54
GARNL3-204ENST00000429629 PSMD14O00487 310 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 RAD17O75943 681 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 DACT2Q5SW24 774 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 ERICH6BQ5W0A0 696 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
GARNL3-204ENST00000429629 NEUROD6Q96NK8 337 aa18.39■□□□□ 0.53
GARNL3-204ENST00000429629 PDS5AQ29RF7 1337 aaKnown RBP18.39■□□□□ 0.53
GARNL3-204ENST00000429629 IQCA1LA6NCM1 817 aa18.38■□□□□ 0.53
GARNL3-204ENST00000429629 IGSF3O75054 1194 aa18.38■□□□□ 0.53
GARNL3-204ENST00000429629 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
GARNL3-204ENST00000429629 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
GARNL3-204ENST00000429629 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
GARNL3-204ENST00000429629 GMLQ99445 158 aa18.38■□□□□ 0.53
GARNL3-204ENST00000429629 KCNQ5Q9NR82 932 aa18.38■□□□□ 0.53
GARNL3-204ENST00000429629 UQCRFS1P1P0C7P4 283 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 TBC1D22AQ8WUA7 517 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 SUGT1Q9Y2Z0 365 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 CHD4Q14839 1912 aa18.37■□□□□ 0.53
GARNL3-204ENST00000429629 ARID4AP29374 1257 aaPredicted RBP18.36■□□□□ 0.53
GARNL3-204ENST00000429629 ADORA1P30542 326 aa18.36■□□□□ 0.53
GARNL3-204ENST00000429629 GTF2IP78347 998 aa18.36■□□□□ 0.53
GARNL3-204ENST00000429629 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
GARNL3-204ENST00000429629 GORABQ5T7V8 394 aa18.36■□□□□ 0.53
GARNL3-204ENST00000429629 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
GARNL3-204ENST00000429629 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
GARNL3-204ENST00000429629 GPBP1L1Q9HC44 474 aaPredicted RBP18.36■□□□□ 0.53
GARNL3-204ENST00000429629 GJA3Q9Y6H8 435 aa18.36■□□□□ 0.53
GARNL3-204ENST00000429629 DICER1Q9UPY3 1922 aaKnown RBP18.35■□□□□ 0.53
GARNL3-204ENST00000429629 POTECB2RU33 542 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 FRAT2O75474 233 aaPredicted RBP18.35■□□□□ 0.53
GARNL3-204ENST00000429629 NEFLP07196 543 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 PHKA1P46020 1223 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 SCNN1DP51172 638 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms