RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PARP3Q9Y6F1 533 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 FSBPO95073 299 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 FNTAP49354 379 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 TUBB4BP68371 445 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 PSMD2Q13200 908 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 TNMDQ9H2S6 317 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 BICC1Q9H694 974 aaKnown RBP10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 CHCHD3Q9NX63 227 aaKnown RBP10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 URI1O94763 535 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 TSHZ1Q6ZSZ6 1077 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 MAGEC3Q8TD91 643 aa10.22□□□□□ -0.77
CDC42BPA-206ENST00000429440 PES1O00541 588 aaKnown RBP10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 SHOX2O60902 331 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 ERLIN1O75477 346 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 FAM163BP0C2L3 166 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 SDSP20132 328 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 GCKP35557 465 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 MAP3K9P80192 1104 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 PDIA5Q14554 519 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 IQCB1Q15051 598 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 MAB21L3Q8N8X9 362 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 GOLGA1Q92805 767 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 BATF3Q9NR55 127 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 L1RE1Q9UN81 338 aa10.21□□□□□ -0.77
CDC42BPA-206ENST00000429440 RIMS2Q9UQ26 1411 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 EME2A4GXA9 379 aaPredicted RBP10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 AP1G2O75843 785 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 GNAI3P08754 354 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 CLNS1AP54105 237 aaKnown RBP10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 PSME1Q06323 249 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.788e-8■■■■■ 59.6
CDC42BPA-206ENST00000429440 RAB21Q9UL25 225 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 SMC3Q9UQE7 1217 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 USP16Q9Y5T5 823 aa10.21□□□□□ -0.78
CDC42BPA-206ENST00000429440 PNPLA6Q8IY17 1366 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 SYT1P21579 422 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CD151P48509 253 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CDCA2Q69YH5 1023 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 TUBBP07437 444 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 ABCD1P33897 745 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 MCM6Q14566 821 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 SIRT2Q8IXJ6 389 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 SAAL1Q96ER3 474 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CLSTN2Q9H4D0 955 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 FAM204AQ9H8W3 233 aa10.2□□□□□ -0.78
CDC42BPA-206ENST00000429440 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 U2AF1L5P0DN76 240 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 IMPDH2P12268 514 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 U2AF1Q01081 240 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 PPP2R3AQ06190 1150 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 TLDC1Q6P9B6 456 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 AFAP1L1Q8TED9 768 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 EPC1Q9H2F5 836 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 KIF9Q9HAQ2 790 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 CD248Q9HCU0 757 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 CAPN7Q9Y6W3 813 aa10.19□□□□□ -0.78
CDC42BPA-206ENST00000429440 EPB41L2O43491 1005 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 RAB27AP51159 221 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 FILIP1LQ4L180 1135 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 WAPLQ7Z5K2 1190 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 CCDC50Q8IVM0 306 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 MMTAG2Q9BU76 263 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 DNAJC25Q9H1X3 360 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 MRFAP1Q9Y605 127 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 N4BP1O75113 896 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 SMTNP53814 917 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 DNM1Q05193 864 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 CLIC6Q96NY7 704 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 TSPAN18Q96SJ8 248 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 DCTPP1Q9H773 170 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 ATP6V0A4Q9HBG4 840 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 MYO6Q9UM54 1294 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 ATP7BP35670 1465 aa10.18□□□□□ -0.78
CDC42BPA-206ENST00000429440 CDKL5O76039 1030 aa10.17□□□□□ -0.78
CDC42BPA-206ENST00000429440 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms