RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 EYSQ5T1H1 3165 aa13.42□□□□□ -0.26
RAE1-205ENST00000429339 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
RAE1-205ENST00000429339 PTCH2Q9Y6C5 1203 aa13.41□□□□□ -0.26
RAE1-205ENST00000429339 ECM29Q5VYK3 1845 aa13.41□□□□□ -0.26
RAE1-205ENST00000429339 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
RAE1-205ENST00000429339 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
RAE1-205ENST00000429339 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
RAE1-205ENST00000429339 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
RAE1-205ENST00000429339 MYCP01106 439 aaPredicted RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
RAE1-205ENST00000429339 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
RAE1-205ENST00000429339 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
RAE1-205ENST00000429339 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
RAE1-205ENST00000429339 CTGFP29279 349 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 UBE2Q1Q7Z7E8 422 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 EYA3Q99504 573 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
RAE1-205ENST00000429339 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
RAE1-205ENST00000429339 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 CERS5Q8N5B7 392 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 GGA1Q9UJY5 639 aa13.37□□□□□ -0.27
RAE1-205ENST00000429339 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 SH3TC2Q8TF17 1288 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
RAE1-205ENST00000429339 TESPA1A2RU30 521 aaPredicted RBP13.35□□□□□ -0.27
RAE1-205ENST00000429339 MTFR1Q15390 333 aa13.35□□□□□ -0.27
RAE1-205ENST00000429339 PLBD2Q8NHP8 589 aa13.35□□□□□ -0.27
RAE1-205ENST00000429339 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
RAE1-205ENST00000429339 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
RAE1-205ENST00000429339 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
RAE1-205ENST00000429339 SNAP23O00161 211 aa13.34□□□□□ -0.27
RAE1-205ENST00000429339 NBPF12Q5TAG4 269 aaPredicted RBP13.34□□□□□ -0.27
RAE1-205ENST00000429339 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
RAE1-205ENST00000429339 MYH3P11055 1940 aa13.34□□□□□ -0.27
RAE1-205ENST00000429339 PRUNE2Q8WUY3 3088 aa13.34□□□□□ -0.27
RAE1-205ENST00000429339 MED23Q9ULK4 1368 aa13.33□□□□□ -0.27
RAE1-205ENST00000429339 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
RAE1-205ENST00000429339 SP3Q02447 781 aa13.33□□□□□ -0.28
RAE1-205ENST00000429339 TRIM28Q13263 835 aaKnown RBP13.33□□□□□ -0.28
RAE1-205ENST00000429339 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
RAE1-205ENST00000429339 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
RAE1-205ENST00000429339 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
RAE1-205ENST00000429339 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
RAE1-205ENST00000429339 ZBTB48P10074 688 aaPredicted RBP13.32□□□□□ -0.28
RAE1-205ENST00000429339 FAM43AQ8N2R8 423 aa13.32□□□□□ -0.28
RAE1-205ENST00000429339 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
RAE1-205ENST00000429339 DEFB129Q9H1M3 183 aa13.32□□□□□ -0.28
RAE1-205ENST00000429339 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
RAE1-205ENST00000429339 XDHP47989 1333 aa13.32□□□□□ -0.28
RAE1-205ENST00000429339 CHL1O00533 1208 aa13.31□□□□□ -0.28
RAE1-205ENST00000429339 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
RAE1-205ENST00000429339 ARMC9Q7Z3E5 817 aa13.31□□□□□ -0.28
RAE1-205ENST00000429339 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
RAE1-205ENST00000429339 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
RAE1-205ENST00000429339 CLRN2A0PK11 232 aa13.3□□□□□ -0.28
RAE1-205ENST00000429339 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
RAE1-205ENST00000429339 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
RAE1-205ENST00000429339 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
RAE1-205ENST00000429339 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
RAE1-205ENST00000429339 MUC3AQ02505 3323 aa13.29□□□□□ -0.28
RAE1-205ENST00000429339 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
RAE1-205ENST00000429339 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
RAE1-205ENST00000429339 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
RAE1-205ENST00000429339 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
RAE1-205ENST00000429339 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
RAE1-205ENST00000429339 RIPK4P57078 832 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 INHBEP58166 350 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
RAE1-205ENST00000429339 SLC9C1Q4G0N8 1177 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
RAE1-205ENST00000429339 TEPSINQ96N21 525 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 GREM2Q9H772 168 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
RAE1-205ENST00000429339 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
RAE1-205ENST00000429339 GTF2IP78347 998 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 Q7L0L9 218 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
RAE1-205ENST00000429339 CDH23Q9H251 3354 aa13.26□□□□□ -0.29
RAE1-205ENST00000429339 G3V3G9 751 aa13.26□□□□□ -0.29
RAE1-205ENST00000429339 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms