RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 HMGB1P09429 215 aaKnown RBP23.56■■□□□ 1.36
CASC4-203ENST00000429162 HSPD1P10809 573 aaKnown RBP23.56■■□□□ 1.36
CASC4-203ENST00000429162 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
CASC4-203ENST00000429162 SLFNL1Q499Z3 407 aa23.56■■□□□ 1.36
CASC4-203ENST00000429162 ZSCAN25Q6NSZ9 544 aa23.56■■□□□ 1.36
CASC4-203ENST00000429162 MPHOSPH8Q99549 860 aa23.56■■□□□ 1.36
CASC4-203ENST00000429162 AKAP11Q9UKA4 1901 aa23.56■■□□□ 1.36
CASC4-203ENST00000429162 MCAMP43121 646 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 TOB2Q14106 344 aaPredicted RBP23.55■■□□□ 1.36
CASC4-203ENST00000429162 APPBP2Q92624 585 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 STX6O43752 255 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 PRPF40AO75400 957 aaKnown RBP23.55■■□□□ 1.36
CASC4-203ENST00000429162 SLC5A1P13866 664 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 FGFR2P21802 821 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 GJB2P29033 226 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 ARID4AP29374 1257 aaPredicted RBP23.55■■□□□ 1.36
CASC4-203ENST00000429162 WASHC4Q2M389 1173 aa23.55■■□□□ 1.36
CASC4-203ENST00000429162 ZSCAN22P10073 491 aaPredicted RBP23.54■■□□□ 1.36
CASC4-203ENST00000429162 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
CASC4-203ENST00000429162 ST3GAL1Q11201 340 aa23.54■■□□□ 1.36
CASC4-203ENST00000429162 OSBP2Q969R2 916 aa23.54■■□□□ 1.36
CASC4-203ENST00000429162 ATRNO75882 1429 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 SYT1P21579 422 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 COL9A3Q14050 684 aaPredicted RBP23.53■■□□□ 1.36
CASC4-203ENST00000429162 RC3H1Q5TC82 1133 aaKnown RBP23.53■■□□□ 1.36
CASC4-203ENST00000429162 TCEANC2Q96MN5 208 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 PDIA4P13667 645 aaKnown RBP23.53■■□□□ 1.36
CASC4-203ENST00000429162 CCDC102BQ68D86 513 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 PI16Q6UXB8 463 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 LAMA4Q16363 1823 aa23.53■■□□□ 1.36
CASC4-203ENST00000429162 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
CASC4-203ENST00000429162 NECAB1Q8N987 351 aa23.52■■□□□ 1.36
CASC4-203ENST00000429162 SEC31BQ9NQW1 1179 aa23.52■■□□□ 1.36
CASC4-203ENST00000429162 CTNNA3Q9UI47 895 aa23.52■■□□□ 1.36
CASC4-203ENST00000429162 MBD3O95983 291 aa23.51■■□□□ 1.35
CASC4-203ENST00000429162 PHKA1P46020 1223 aa23.51■■□□□ 1.35
CASC4-203ENST00000429162 STOX1Q6ZVD7 989 aa23.51■■□□□ 1.35
CASC4-203ENST00000429162 ATP6V1DQ9Y5K8 247 aa23.51■■□□□ 1.35
CASC4-203ENST00000429162 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
CASC4-203ENST00000429162 CDC5LQ99459 802 aaKnown RBP23.5■■□□□ 1.35
CASC4-203ENST00000429162 LY75O60449 1722 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 ADD2P35612 726 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 MRE11P49959 708 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 Q6ZUG5 572 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 COL24A1Q17RW2 1714 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 F13A1P00488 732 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 NCLP19338 710 aaKnown RBP23.49■■□□□ 1.35
CASC4-203ENST00000429162 DHX32Q7L7V1 743 aaKnown RBP23.49■■□□□ 1.35
CASC4-203ENST00000429162 PTF1AQ7RTS3 328 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 CHAMP1Q96JM3 812 aa23.49■■□□□ 1.35
CASC4-203ENST00000429162 E7EWF7 191 aa23.48■■□□□ 1.35
CASC4-203ENST00000429162 RPS6KA4O75676 772 aa23.48■■□□□ 1.35
CASC4-203ENST00000429162 PDCP20941 246 aa23.48■■□□□ 1.35
CASC4-203ENST00000429162 GJD4Q96KN9 370 aaPredicted RBP23.48■■□□□ 1.35
CASC4-203ENST00000429162 CASZ1Q86V15 1759 aa23.48■■□□□ 1.35
CASC4-203ENST00000429162 KCNQ4P56696 695 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 FGD1P98174 961 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 PIH1D3Q9NQM4 214 aaKnown RBP23.47■■□□□ 1.35
CASC4-203ENST00000429162 NARFQ9UHQ1 456 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 CCNL1Q9UK58 526 aaPredicted RBP23.47■■□□□ 1.35
CASC4-203ENST00000429162 DOCK2Q92608 1830 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 GPAA1O43292 621 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 UBE3CQ15386 1083 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 IMMTQ16891 758 aaKnown RBP23.47■■□□□ 1.35
CASC4-203ENST00000429162 ERFEQ4G0M1 354 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 CAVIN1Q6NZI2 390 aaKnown RBP23.47■■□□□ 1.35
CASC4-203ENST00000429162 GPT2Q8TD30 523 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 PUS7LQ9H0K6 701 aaKnown RBP23.47■■□□□ 1.35
CASC4-203ENST00000429162 MTMR6Q9Y217 621 aa23.47■■□□□ 1.35
CASC4-203ENST00000429162 SF3B3Q15393 1217 aaKnown RBP23.46■■□□□ 1.35
CASC4-203ENST00000429162 A0A1B0GUL6 1792 aa23.46■■□□□ 1.35
CASC4-203ENST00000429162 SLC9C2Q5TAH2 1124 aa23.45■■□□□ 1.35
CASC4-203ENST00000429162 SPATA5Q8NB90 893 aa23.45■■□□□ 1.35
CASC4-203ENST00000429162 TMEM87AQ8NBN3 555 aa23.45■■□□□ 1.35
CASC4-203ENST00000429162 NYXQ9GZU5 481 aa23.45■■□□□ 1.35
CASC4-203ENST00000429162 SBF2Q86WG5 1849 aa23.45■■□□□ 1.34
CASC4-203ENST00000429162 AFF2P51816 1311 aa23.45■■□□□ 1.34
CASC4-203ENST00000429162 FOXP2O15409 715 aa23.45■■□□□ 1.34
CASC4-203ENST00000429162 IDH1O75874 414 aaKnown RBP23.45■■□□□ 1.34
CASC4-203ENST00000429162 GRPEL1Q9HAV7 217 aa23.45■■□□□ 1.34
CASC4-203ENST00000429162 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
CASC4-203ENST00000429162 GNPATO15228 680 aa23.44■■□□□ 1.34
CASC4-203ENST00000429162 EXOSC10Q01780 885 aaKnown RBP23.44■■□□□ 1.34
CASC4-203ENST00000429162 CHRNDQ07001 517 aa23.44■■□□□ 1.34
CASC4-203ENST00000429162 STK3Q13188 491 aa23.44■■□□□ 1.34
CASC4-203ENST00000429162 BRF1Q92994 677 aa23.44■■□□□ 1.34
CASC4-203ENST00000429162 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
CASC4-203ENST00000429162 XRCC6P12956 609 aaKnown RBP eCLIP23.43■■□□□ 1.34
CASC4-203ENST00000429162 PDE6AP16499 860 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 ZNF445P59923 1031 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 LARP1BQ659C4 914 aaKnown RBP23.43■■□□□ 1.34
CASC4-203ENST00000429162 TBC1D9BQ66K14 1250 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 ANKRD18AQ8IVF6 992 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 AGXT2Q9BYV1 514 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 VPS37CA5D8V6 355 aaPredicted RBP23.43■■□□□ 1.34
CASC4-203ENST00000429162 ZPR1O75312 459 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 GTF2E1P29083 439 aaPredicted RBP23.43■■□□□ 1.34
CASC4-203ENST00000429162 SLC10A5Q5PT55 438 aa23.43■■□□□ 1.34
CASC4-203ENST00000429162 TTLL5Q6EMB2 1281 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms