RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 PGAP2Q9UHJ9 254 aa14.46□□□□□ -0.09
RCC1-208ENST00000429051 WTIPA6NIX2 430 aaPredicted RBP14.45□□□□□ -0.1
RCC1-208ENST00000429051 TAF5LO75529 589 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 TBC1D10BQ4KMP7 808 aaPredicted RBP14.45□□□□□ -0.1
RCC1-208ENST00000429051 STRIP1Q5VSL9 837 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 C15orf52Q6ZUT6 534 aaKnown RBP14.45□□□□□ -0.1
RCC1-208ENST00000429051 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 SAMD7Q7Z3H4 446 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 ZNF804AQ7Z570 1209 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 FBXW7Q969H0 707 aa14.45□□□□□ -0.1
RCC1-208ENST00000429051 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 SHTN1A0MZ66 631 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 PLIN1O60240 522 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 USP17L8P0C7I0 530 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
RCC1-208ENST00000429051 MMP14P50281 582 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 HIRAP54198 1017 aaPredicted RBP14.44□□□□□ -0.1
RCC1-208ENST00000429051 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
RCC1-208ENST00000429051 TXNRD3Q86VQ6 643 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 OGFOD1Q8N543 542 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
RCC1-208ENST00000429051 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
RCC1-208ENST00000429051 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
RCC1-208ENST00000429051 KLRK1P26718 216 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 ZNF280AP59817 542 aaPredicted RBP14.43□□□□□ -0.1
RCC1-208ENST00000429051 UBE4AQ14139 1066 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 DACT2Q5SW24 774 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 TTLL5Q6EMB2 1281 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 ANKRD44Q8N8A2 993 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 DCPSQ96C86 337 aaKnown RBP14.43□□□□□ -0.1
RCC1-208ENST00000429051 MKRN1Q9UHC7 482 aaKnown RBP14.43□□□□□ -0.1
RCC1-208ENST00000429051 ABT1Q9ULW3 272 aaKnown RBP14.43□□□□□ -0.1
RCC1-208ENST00000429051 PCNTO95613 3336 aa14.43□□□□□ -0.1
RCC1-208ENST00000429051 TRAF5O00463 557 aa14.42□□□□□ -0.1
RCC1-208ENST00000429051 GMLQ99445 158 aa14.42□□□□□ -0.1
RCC1-208ENST00000429051 GLIS2Q9BZE0 524 aaPredicted RBP14.42□□□□□ -0.1
RCC1-208ENST00000429051 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
RCC1-208ENST00000429051 GTF2IP78347 998 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 DEFB115Q30KQ5 88 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 INTS3Q68E01 1043 aaKnown RBP14.41□□□□□ -0.1
RCC1-208ENST00000429051 FRAT1Q92837 279 aaPredicted RBP14.41□□□□□ -0.1
RCC1-208ENST00000429051 MYOZ2Q9NPC6 264 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 HDAC9Q9UKV0 1011 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 RIPOR2Q9Y4F9 1068 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 IRS2Q9Y4H2 1338 aa14.41□□□□□ -0.1
RCC1-208ENST00000429051 RASSF10A6NK89 507 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 SNAP23O00161 211 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
RCC1-208ENST00000429051 EGFRP00533 1210 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 GNAI3P08754 354 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 IL1R1P14778 569 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 KRT26Q7Z3Y9 468 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 SULF1Q8IWU6 871 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
RCC1-208ENST00000429051 GGA3Q9NZ52 723 aa14.4□□□□□ -0.1
RCC1-208ENST00000429051 BCAR3O75815 825 aa14.39□□□□□ -0.11
RCC1-208ENST00000429051 CST9Q5W186 159 aa14.39□□□□□ -0.11
RCC1-208ENST00000429051 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
RCC1-208ENST00000429051 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
RCC1-208ENST00000429051 PITPNM2Q9BZ72 1349 aa14.39□□□□□ -0.11
RCC1-208ENST00000429051 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
RCC1-208ENST00000429051 PDE8BO95263 885 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 TRIM27P14373 513 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 HIBADHP31937 336 aaKnown RBP14.38□□□□□ -0.11
RCC1-208ENST00000429051 ECE1P42892 770 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
RCC1-208ENST00000429051 FMR1Q06787 632 aaKnown RBP eCLIP14.38□□□□□ -0.11
RCC1-208ENST00000429051 SCARF1Q14162 830 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 LRRC24Q50LG9 513 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 VPS37DQ86XT2 251 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 LRRFIP2Q9Y608 721 aaKnown RBP14.38□□□□□ -0.11
RCC1-208ENST00000429051 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
RCC1-208ENST00000429051 EYA2O00167 538 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 VEGFBP49765 207 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
RCC1-208ENST00000429051 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
RCC1-208ENST00000429051 KIAA0825Q8IV33 1275 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 MEIS3Q99687 375 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 MXD3Q9BW11 206 aa14.37□□□□□ -0.11
RCC1-208ENST00000429051 ARAP2Q8WZ64 1704 aa14.36□□□□□ -0.11
RCC1-208ENST00000429051 SASH1O94885 1247 aa14.36□□□□□ -0.11
RCC1-208ENST00000429051 GYG1P46976 350 aa14.36□□□□□ -0.11
RCC1-208ENST00000429051 RFX5P48382 616 aaPredicted RBP14.36□□□□□ -0.11
RCC1-208ENST00000429051 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
RCC1-208ENST00000429051 PUM3Q15397 648 aaKnown RBP14.36□□□□□ -0.11
RCC1-208ENST00000429051 VGLL2Q8N8G2 317 aa14.36□□□□□ -0.11
RCC1-208ENST00000429051 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
RCC1-208ENST00000429051 WDR33Q9C0J8 1336 aaKnown RBP14.36□□□□□ -0.11
RCC1-208ENST00000429051 ADM5C9JUS6 153 aa14.35□□□□□ -0.11
RCC1-208ENST00000429051 WNT10BO00744 389 aa14.35□□□□□ -0.11
RCC1-208ENST00000429051 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms