RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 PDE4CQ08493 712 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 IGF2-ASQ6U949 168 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 GJD3Q8N144 294 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 DCAF11Q8TEB1 546 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 LACRTQ9GZZ8 138 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 CHRDQ9H2X0 955 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 TUT1Q9H6E5 874 aaKnown RBP6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 CCDC87Q9NVE4 849 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 SALL4Q9UJQ4 1053 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 PPME1Q9Y570 386 aa6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.24□□□□□ -1.41
CCDC144A-208ENST00000428950 TNFRSF21O75509 655 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 CDC27P30260 824 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 SETDB1Q15047 1291 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 NKAPLQ5M9Q1 402 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 SNX29Q8TEQ0 813 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 PMEPA1Q969W9 287 aa6.23□□□□□ -1.41
CCDC144A-208ENST00000428950 PHACTR2O75167 634 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 ACPPP15309 386 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 PTPRAP18433 802 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 ADAMTSL4Q6UY14 1074 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 SEMA6BQ9H3T3 888 aa6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 FOXD3Q9UJU5 478 aaPredicted RBP6.22□□□□□ -1.41
CCDC144A-208ENST00000428950 LINC01387J3KSC0 135 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 DYRK3O43781 588 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 NOS3P29474 1203 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 TXNDC2Q86VQ3 553 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 POP1Q99575 1024 aaKnown RBP6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 SSBP4Q9BWG4 385 aaPredicted RBP6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 ADAM19Q9H013 955 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 DZANK1Q9NVP4 752 aa6.21□□□□□ -1.42
CCDC144A-208ENST00000428950 FAM177BA6PVY3 158 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 NFKBIEO00221 500 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 EREGO14944 169 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 EPHA1P21709 976 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 ITGB7P26010 798 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 IREB2P48200 963 aaKnown RBP6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 ECM1Q16610 540 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 TXNDC11Q6PKC3 985 aa6.2□□□□□ -1.42
CCDC144A-208ENST00000428950 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 PDE2AO00408 941 aaPredicted RBP6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 H2AFB1P0C5Y9 115 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 H2AFB2P0C5Z0 115 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 EDN3P14138 238 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 CDC25BP30305 580 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 ARHGAP4P98171 946 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 FAM117BQ6P1L5 589 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 GALNT11Q8NCW6 608 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 TP53INP1Q96A56 240 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 HHIPQ96QV1 700 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 AKTIPQ9H8T0 292 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 SH2B1Q9NRF2 756 aaPredicted RBP6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 BRPF3Q9ULD4 1205 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 AMOTL2Q9Y2J4 779 aa6.19□□□□□ -1.42
CCDC144A-208ENST00000428950 H3BRJ5 948 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 FSCN2O14926 492 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 TRPA1O75762 1119 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 CD68P34810 354 aaPredicted RBP6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 CABP4P57796 275 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 ZMYM1Q5SVZ6 1142 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 TMEM130Q8N3G9 435 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 TMEM102Q8N9M5 508 aaPredicted RBP6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 CCER1Q8TC90 406 aaPredicted RBP6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 MEGF10Q96KG7 1140 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 OSMRQ99650 979 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 ZKSCAN3Q9BRR0 538 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 CARD10Q9BWT7 1032 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 ZFYVE28Q9HCC9 887 aa6.18□□□□□ -1.42
CCDC144A-208ENST00000428950 TM4SF5O14894 197 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 NDUFB5O43674 189 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 PIP4K2BP78356 416 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 Q6ZS46 218 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 KLHL23Q8NBE8 558 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 WNT8BQ93098 351 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 SOX13Q9UN79 622 aa6.17□□□□□ -1.42
CCDC144A-208ENST00000428950 ALX3O95076 343 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 WISP1O95388 367 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 ACAD11Q709F0 780 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 NXPE3Q969Y0 559 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 FAM129BQ96TA1 746 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 LATS2Q9NRM7 1088 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 KCNK4Q9NYG8 393 aa6.16□□□□□ -1.42
CCDC144A-208ENST00000428950 POLR3DP05423 398 aaPredicted RBP6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 PDE3BQ13370 1112 aa6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 PEAR1Q5VY43 1037 aaPredicted RBP6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 DZIP1LQ8IYY4 767 aaKnown RBP6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 AGGF1Q8N302 714 aaeCLIP6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
CCDC144A-208ENST00000428950 ADAM11O75078 769 aa6.14□□□□□ -1.43
CCDC144A-208ENST00000428950 BRD1O95696 1058 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms