RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
SGCE-204ENST00000428696 SLC5A1P13866 664 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 GYG1P46976 350 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 UBE4AQ14139 1066 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 ATP2B3Q16720 1220 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 SIRT2Q8IXJ6 389 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 NEUROD6Q96NK8 337 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 GPBP1L1Q9HC44 474 aaPredicted RBP18.01■□□□□ 0.47
SGCE-204ENST00000428696 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
SGCE-204ENST00000428696 GLTPD2A6NH11 291 aa18■□□□□ 0.47
SGCE-204ENST00000428696 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SGCE-204ENST00000428696 TIMM10P62072 90 aa18■□□□□ 0.47
SGCE-204ENST00000428696 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
SGCE-204ENST00000428696 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
SGCE-204ENST00000428696 CXCL9Q07325 125 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 TNIP1Q15025 636 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 CHD4Q14839 1912 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
SGCE-204ENST00000428696 SBF1O95248 1867 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 YDJCA8MPS7 323 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 HIBADHP31937 336 aaKnown RBP17.98■□□□□ 0.47
SGCE-204ENST00000428696 GORABQ5T7V8 394 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 VGLL2Q8N8G2 317 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 ZNF784Q8NCA9 323 aaPredicted RBP17.98■□□□□ 0.47
SGCE-204ENST00000428696 LPIN2Q92539 896 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 IQSEC3Q9UPP2 1182 aaPredicted RBP17.98■□□□□ 0.47
SGCE-204ENST00000428696 AKAP2Q9Y2D5 859 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 DUOX1Q9NRD9 1551 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
SGCE-204ENST00000428696 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
SGCE-204ENST00000428696 SASH1O94885 1247 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 BCAMP50895 628 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 HSP90AB4PQ58FF6 505 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 PODNQ7Z5L7 613 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 GPC2Q8N158 579 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 FAM84BQ96KN1 310 aaPredicted RBP17.97■□□□□ 0.47
SGCE-204ENST00000428696 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
SGCE-204ENST00000428696 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SGCE-204ENST00000428696 COL4A5P29400 1685 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 PSMD14O00487 310 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 GTF2IP78347 998 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 ERC1Q8IUD2 1116 aa17.96■□□□□ 0.47
SGCE-204ENST00000428696 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
SGCE-204ENST00000428696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.96■□□□□ 0.47
SGCE-204ENST00000428696 A0A1B0GUL7 405 aa17.95■□□□□ 0.46
SGCE-204ENST00000428696 FGFR2P21802 821 aa17.95■□□□□ 0.46
SGCE-204ENST00000428696 LMOD1P29536 600 aaPredicted RBP17.95■□□□□ 0.46
SGCE-204ENST00000428696 ADORA1P30542 326 aa17.95■□□□□ 0.46
SGCE-204ENST00000428696 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
SGCE-204ENST00000428696 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
SGCE-204ENST00000428696 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
SGCE-204ENST00000428696 IL1RAPL2Q9NP60 686 aa17.95■□□□□ 0.46
SGCE-204ENST00000428696 GMPSP49915 693 aaPredicted RBP17.94■□□□□ 0.46
SGCE-204ENST00000428696 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
SGCE-204ENST00000428696 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
SGCE-204ENST00000428696 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
SGCE-204ENST00000428696 XAGE2Q96GT9 111 aa17.93■□□□□ 0.46
SGCE-204ENST00000428696 CCDC8Q9H0W5 538 aaPredicted RBP17.93■□□□□ 0.46
SGCE-204ENST00000428696 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
SGCE-204ENST00000428696 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 NEFLP07196 543 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 FBXO33Q7Z6M2 555 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 RHPN1Q8TCX5 695 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 IRS2Q9Y4H2 1338 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
SGCE-204ENST00000428696 AAMPQ13685 434 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
SGCE-204ENST00000428696 TNNI3KQ59H18 835 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 RBM26Q5T8P6 1007 aaKnown RBP17.91■□□□□ 0.46
SGCE-204ENST00000428696 AACSQ86V21 672 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 KIF1BPQ96EK5 621 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
SGCE-204ENST00000428696 HACL1Q9UJ83 578 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 FPGT-TNNI3KV9GXZ4 949 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
SGCE-204ENST00000428696 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 H7C1D1 291 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 VIL1P09327 827 aaKnown RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 IL1R1P14778 569 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 EPS15P42566 896 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 PHKA1P46020 1223 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 STRIP1Q5VSL9 837 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 RSBN1LQ6PCB5 846 aaPredicted RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 CLASRPQ8N2M8 674 aaKnown RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
SGCE-204ENST00000428696 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
SGCE-204ENST00000428696 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms