RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 PRDM1O75626 825 aa17.56■□□□□ 0.4
SCAP-206ENST00000428413 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
SCAP-206ENST00000428413 KDRP35968 1356 aa17.56■□□□□ 0.4
SCAP-206ENST00000428413 IFIT3O14879 490 aaKnown RBP17.56■□□□□ 0.4
SCAP-206ENST00000428413 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
SCAP-206ENST00000428413 TPM4P67936 248 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 TMC6Q7Z403 805 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 NAPBQ9H115 298 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 E7EWF7 191 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 EYA2O00167 538 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
SCAP-206ENST00000428413 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 STARD3NLO95772 234 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 DMTNQ08495 405 aa17.55■□□□□ 0.4
SCAP-206ENST00000428413 ERICH2A1L162 156 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 HSPD1P10809 573 aaKnown RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 NAA30Q147X3 362 aaPredicted RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 CCDC112Q8NEF3 446 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 PLBD2Q8NHP8 589 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 DYNC1I1O14576 645 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
SCAP-206ENST00000428413 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
SCAP-206ENST00000428413 NCOA3Q9Y6Q9 1424 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
SCAP-206ENST00000428413 HOXB7P09629 217 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 OSBP2Q969R2 916 aa17.53■□□□□ 0.4
SCAP-206ENST00000428413 ATP5JP18859 108 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 ITGA6P23229 1130 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.41e-6■■■■□ 20.3
SCAP-206ENST00000428413 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
SCAP-206ENST00000428413 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 GOLGA8FQ08AF8 430 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 GOLGA8DPQ0D2H9 430 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 SCARF1Q14162 830 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 CCDC94Q9BW85 323 aaPredicted RBP17.52■□□□□ 0.4
SCAP-206ENST00000428413 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.4
SCAP-206ENST00000428413 NBPF26B4DH59 902 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.39
SCAP-206ENST00000428413 NBPF14Q5TI25 921 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.39
SCAP-206ENST00000428413 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 PDCL2Q8N4E4 241 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 NBPF15Q8N660 670 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
SCAP-206ENST00000428413 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 GPAA1O43292 621 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 FGAP02671 866 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 SKILP12757 684 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAP-206ENST00000428413 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■■■■□ 20.8
SCAP-206ENST00000428413 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 STAMQ92783 540 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 M0R2C6 588 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 IL2RBP14784 551 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 PDIA6Q15084 440 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
SCAP-206ENST00000428413 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
SCAP-206ENST00000428413 COBLO75128 1261 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 GPIHBP1Q8IV16 184 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 AOX1Q06278 1338 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 PGBD1Q96JS3 809 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 GREM2Q9H772 168 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 ARMT1Q9H993 441 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 MCM5P33992 734 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
SCAP-206ENST00000428413 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
SCAP-206ENST00000428413 NCOA7Q8NI08 942 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 KCNJ14Q9UNX9 436 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 KIF20AO95235 890 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
SCAP-206ENST00000428413 BABAM1Q9NWV8 329 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 AP5Z1O43299 807 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 AFMP43652 599 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
SCAP-206ENST00000428413 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
SCAP-206ENST00000428413 STX17P56962 302 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms