RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 COPS6Q7L5N1 327 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 NCOA5Q9HCD5 579 aaKnown RBP12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 CWC15Q9P013 229 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 C3P01024 1663 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 OSBPL5Q9H0X9 879 aaPredicted RBP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 A0A087WZG4 1122 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 BRAPQ7Z569 592 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 AK7Q96M32 723 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.41
ATP2C1-204ENST00000428331 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 A0A1W2PQ27 194 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 A0A1W2PQ64 194 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 A0A1W2PQD8 194 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 CCZ1BP86790 482 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 CCZ1P86791 482 aaPredicted RBP12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 GCKRQ14397 625 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.42
ATP2C1-204ENST00000428331 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 A0A087WWV3 80 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 IFIT1P09914 478 aaKnown RBP12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 YEATS4O95619 227 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 SYKP43405 635 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 NLRP12P59046 1061 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 TAF7LQ5H9L4 462 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 CASQ1P31415 396 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 FANCCQ00597 558 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 RTEL1Q9NZ71 1219 aa12.45□□□□□ -0.42
ATP2C1-204ENST00000428331 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 DHX40Q8IX18 779 aaKnown RBP12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 NEURL1BA8MQ27 555 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 ZNF202O95125 648 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 CDKL5O76039 1030 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 HAUS7Q99871 368 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
ATP2C1-204ENST00000428331 GNG11P61952 73 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 NDUFA8P51970 172 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 DPCR1Q3MIW9 517 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 MYL5Q02045 173 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 SAFBQ15424 915 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 UTP14AQ9BVJ6 771 aaKnown RBP12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
ATP2C1-204ENST00000428331 E7EWF7 191 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 AGLP35573 1532 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 APPP05067 770 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 CARD6Q9BX69 1037 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 RICTORQ6R327 1708 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 ATP5J2-PTCD1G3V325 749 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 EVCP57679 992 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 ANO1Q5XXA6 986 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 CCDC102BQ68D86 513 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 FMR1NBQ8N0W7 255 aaPredicted RBP12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 CLCN6P51797 869 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 SLC39A6Q13433 755 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
ATP2C1-204ENST00000428331 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
ATP2C1-204ENST00000428331 KCNJ6P48051 423 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms