RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 WDR24Q96S15 920 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 GBP3Q9H0R5 595 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 A1CFQ9NQ94 594 aaKnown RBP18.56■□□□□ 0.56
C9orf3-206ENST00000428313 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
C9orf3-206ENST00000428313 BLOC1S2Q6QNY1 142 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 SRGAP1Q7Z6B7 1085 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 BRF1Q92994 677 aa18.56■□□□□ 0.56
C9orf3-206ENST00000428313 RBM8AQ9Y5S9 174 aaKnown RBP18.56■□□□□ 0.56
C9orf3-206ENST00000428313 A0A087WWV3 80 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 H3BQV1 296 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 FANCCQ00597 558 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 IFFO2Q5TF58 517 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 STAG1Q8WVM7 1258 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 ANKZF1Q9H8Y5 726 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 ABCC6O95255 1503 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 CACNA1FO60840 1977 aa18.55■□□□□ 0.56
C9orf3-206ENST00000428313 CCDC189A1A4V9 331 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 IKBKBO14920 756 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 N4BP1O75113 896 aaKnown RBP18.54■□□□□ 0.56
C9orf3-206ENST00000428313 TUBBP07437 444 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 MNAT1P51948 309 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 TOB2Q14106 344 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-206ENST00000428313 POLA2Q14181 598 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 FSIP1Q8NA03 581 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 DDX11Q96FC9 970 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
C9orf3-206ENST00000428313 CRB1P82279 1406 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 NCAPHQ15003 741 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 TMEM139Q8IV31 216 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 CEP112Q8N8E3 955 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 MAP4K1Q92918 833 aa18.54■□□□□ 0.56
C9orf3-206ENST00000428313 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
C9orf3-206ENST00000428313 C21orf2O43822 256 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 FBLN1P23142 703 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 HNRNPH1P31943 449 aaKnown RBP18.53■□□□□ 0.56
C9orf3-206ENST00000428313 TUBB2AQ13885 445 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 DPCR1Q3MIW9 517 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 FMR1NBQ8N0W7 255 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-206ENST00000428313 CNPY4Q8N129 248 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 DHX58Q96C10 678 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 TUBB2BQ9BVA1 445 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 KIAA1468Q9P260 1216 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 SLC27A2O14975 620 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 NAA16Q6N069 864 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-206ENST00000428313 GGT6Q6P531 493 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 KAT2BQ92831 832 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 ZNF396Q96N95 335 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-206ENST00000428313 TMEM131LA2VDJ0 1609 aa18.53■□□□□ 0.56
C9orf3-206ENST00000428313 ANKRD65E5RJM6 399 aa18.52■□□□□ 0.56
C9orf3-206ENST00000428313 CUTAO60888 179 aa18.52■□□□□ 0.56
C9orf3-206ENST00000428313 NLRP12P59046 1061 aa18.52■□□□□ 0.56
C9orf3-206ENST00000428313 EGFL6Q8IUX8 553 aa18.52■□□□□ 0.56
C9orf3-206ENST00000428313 SNRKQ9NRH2 765 aa18.52■□□□□ 0.56
C9orf3-206ENST00000428313 DLC1Q96QB1 1528 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 MYO1BO43795 1136 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.55
C9orf3-206ENST00000428313 CASP8Q14790 479 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 VSTM4Q8IW00 320 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 MRPS27Q92552 414 aaKnown RBP18.52■□□□□ 0.55
C9orf3-206ENST00000428313 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 ABCB6Q9NP58 842 aa18.52■□□□□ 0.55
C9orf3-206ENST00000428313 HSP90AB3PQ58FF7 597 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 DDX54Q8TDD1 881 aaKnown RBP18.51■□□□□ 0.55
C9orf3-206ENST00000428313 CCDC102AQ96A19 550 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 SDF4Q9BRK5 362 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 NEO1Q92859 1461 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 AFAP1L1Q8TED9 768 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 VIPAS39Q9H9C1 493 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 CABP1Q9NZU7 370 aa18.51■□□□□ 0.55
C9orf3-206ENST00000428313 A0A1W2PQ27 194 aa18.5■□□□□ 0.55
C9orf3-206ENST00000428313 A0A1W2PQ64 194 aa18.5■□□□□ 0.55
C9orf3-206ENST00000428313 A0A1W2PQD8 194 aa18.5■□□□□ 0.55
C9orf3-206ENST00000428313 HIP1O00291 1037 aa18.5■□□□□ 0.55
C9orf3-206ENST00000428313 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-206ENST00000428313 AARSP49588 968 aaKnown RBP eCLIP18.5■□□□□ 0.55
C9orf3-206ENST00000428313 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
C9orf3-206ENST00000428313 FAM177A1Q8N128 213 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-206ENST00000428313 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-206ENST00000428313 JAK2O60674 1132 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 CEBPZQ03701 1054 aaKnown RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■□□□□ 9.9
C9orf3-206ENST00000428313 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 ERCC4Q92889 916 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 PNKPQ96T60 521 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 EXOC5O00471 708 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 PPP1R12AO14974 1030 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-206ENST00000428313 STX10O60499 249 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 FLIIQ13045 1269 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
C9orf3-206ENST00000428313 SHOX2O60902 331 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms