RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 TTLL11Q8NHH1 800 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 FUCA2Q9BTY2 467 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
PMPCB-202ENST00000428154 WDR19Q8NEZ3 1342 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 GOLGA6L4A6NEF3 574 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 FKBP4Q02790 459 aaKnown RBP eCLIP23.73■■□□□ 1.39
PMPCB-202ENST00000428154 ATP2B3Q16720 1220 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 IMMTQ16891 758 aaKnown RBP23.73■■□□□ 1.39
PMPCB-202ENST00000428154 RGS22Q8NE09 1264 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 SPATA32Q96LK8 384 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 DDX19AQ9NUU7 478 aaKnown RBP23.73■■□□□ 1.39
PMPCB-202ENST00000428154 ZKSCAN5Q9Y2L8 839 aa23.73■■□□□ 1.39
PMPCB-202ENST00000428154 PDE8AO60658 829 aa23.72■■□□□ 1.39
PMPCB-202ENST00000428154 CCDC192P0DO97 292 aa23.72■■□□□ 1.39
PMPCB-202ENST00000428154 SCRN1Q12765 414 aa23.72■■□□□ 1.39
PMPCB-202ENST00000428154 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
PMPCB-202ENST00000428154 NUP98P52948 1817 aa23.72■■□□□ 1.39
PMPCB-202ENST00000428154 RIC1Q4ADV7 1423 aa23.72■■□□□ 1.39
PMPCB-202ENST00000428154 RESTQ13127 1097 aa23.71■■□□□ 1.39
PMPCB-202ENST00000428154 METTL24Q5JXM2 366 aa23.71■■□□□ 1.39
PMPCB-202ENST00000428154 LDHAL6AQ6ZMR3 332 aa23.71■■□□□ 1.39
PMPCB-202ENST00000428154 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.71■■□□□ 1.39
PMPCB-202ENST00000428154 ITGA6P23229 1130 aa23.7■■□□□ 1.39
PMPCB-202ENST00000428154 OSBP2Q969R2 916 aa23.7■■□□□ 1.39
PMPCB-202ENST00000428154 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.39
PMPCB-202ENST00000428154 M0R2C6 588 aa23.7■■□□□ 1.38
PMPCB-202ENST00000428154 CHGBP05060 677 aa23.7■■□□□ 1.38
PMPCB-202ENST00000428154 NSUN7Q8NE18 718 aaKnown RBP23.7■■□□□ 1.38
PMPCB-202ENST00000428154 LEO1Q8WVC0 666 aaPredicted RBP23.7■■□□□ 1.38
PMPCB-202ENST00000428154 IRS4O14654 1257 aaPredicted RBP23.69■■□□□ 1.38
PMPCB-202ENST00000428154 UQCRFS1P1P0C7P4 283 aa23.69■■□□□ 1.38
PMPCB-202ENST00000428154 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.69■■□□□ 1.38
PMPCB-202ENST00000428154 FERMT3Q86UX7 667 aa23.69■■□□□ 1.38
PMPCB-202ENST00000428154 NUP62CLQ9H1M0 184 aa23.69■■□□□ 1.38
PMPCB-202ENST00000428154 ATRNO75882 1429 aa23.69■■□□□ 1.38
PMPCB-202ENST00000428154 JAK2O60674 1132 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 ADORA1P30542 326 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 HLFQ16534 295 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 MAP3K11Q16584 847 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 WASHC4Q2M389 1173 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 CNNM1Q9NRU3 951 aa23.68■■□□□ 1.38
PMPCB-202ENST00000428154 TRMT112Q9UI30 125 aaKnown RBP23.68■■□□□ 1.38
PMPCB-202ENST00000428154 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
PMPCB-202ENST00000428154 DHX16O60231 1041 aaKnown RBP23.67■■□□□ 1.38
PMPCB-202ENST00000428154 TERF1P54274 439 aa23.67■■□□□ 1.38
PMPCB-202ENST00000428154 MROH5Q6ZUA9 1318 aa23.67■■□□□ 1.38
PMPCB-202ENST00000428154 LRP5O75197 1615 aa23.67■■□□□ 1.38
PMPCB-202ENST00000428154 CICQ96RK0 1608 aaPredicted RBP23.67■■□□□ 1.38
PMPCB-202ENST00000428154 ZNF34Q8IZ26 560 aa23.67■■□□□ 1.38
PMPCB-202ENST00000428154 MYH15Q9Y2K3 1946 aa23.67■■□□□ 1.38
PMPCB-202ENST00000428154 SALL1Q9NSC2 1324 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 AKAP11Q9UKA4 1901 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 OFD1O75665 1012 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 PDE8BO95263 885 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 CAVIN2O95810 425 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 ZAP70P43403 619 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 UBE3CQ15386 1083 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 DZIP3Q86Y13 1208 aaKnown RBP23.66■■□□□ 1.38
PMPCB-202ENST00000428154 VGLL2Q8N8G2 317 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 SLC4A9Q96Q91 983 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 GREM2Q9H772 168 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
PMPCB-202ENST00000428154 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
PMPCB-202ENST00000428154 PTPDC1A2A3K4 754 aa23.65■■□□□ 1.38
PMPCB-202ENST00000428154 KDM4AO75164 1064 aa23.65■■□□□ 1.38
PMPCB-202ENST00000428154 PDIA3P30101 505 aaKnown RBP23.65■■□□□ 1.38
PMPCB-202ENST00000428154 APOBRQ0VD83 1088 aa23.65■■□□□ 1.38
PMPCB-202ENST00000428154 RBM43Q6ZSC3 357 aaKnown RBP23.65■■□□□ 1.38
PMPCB-202ENST00000428154 ZNF396Q96N95 335 aaPredicted RBP23.65■■□□□ 1.38
PMPCB-202ENST00000428154 NAP1L5Q96NT1 182 aaPredicted RBP23.65■■□□□ 1.38
PMPCB-202ENST00000428154 ARAP2Q8WZ64 1704 aa23.65■■□□□ 1.38
PMPCB-202ENST00000428154 PTMAP06454 111 aaKnown RBP23.64■■□□□ 1.38
PMPCB-202ENST00000428154 HCLS1P14317 486 aaPredicted RBP23.64■■□□□ 1.38
PMPCB-202ENST00000428154 GPTP24298 496 aa23.64■■□□□ 1.38
PMPCB-202ENST00000428154 GIMAP6Q6P9H5 292 aa23.64■■□□□ 1.38
PMPCB-202ENST00000428154 NCOA7Q8NI08 942 aa23.64■■□□□ 1.38
PMPCB-202ENST00000428154 ARID4AP29374 1257 aaPredicted RBP23.64■■□□□ 1.37
PMPCB-202ENST00000428154 DOT1LQ8TEK3 1739 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 NWD2Q9ULI1 1742 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 FGAP02671 866 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 TPM3P06753 285 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 ADD2P35612 726 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 LPIN2Q92539 896 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 LRRC2Q9BYS8 371 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 TNMDQ9H2S6 317 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 RCOR1Q9UKL0 485 aa23.63■■□□□ 1.37
PMPCB-202ENST00000428154 RREB1Q92766 1687 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 ZNF213O14771 459 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 CTDNEP1O95476 244 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 PUM3Q15397 648 aaKnown RBP23.62■■□□□ 1.37
PMPCB-202ENST00000428154 PARP10Q53GL7 1025 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 CLSTN2Q9H4D0 955 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 TBC1D2BQ9UPU7 963 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 GPAA1O43292 621 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 EIF5P55010 431 aaKnown RBP23.62■■□□□ 1.37
PMPCB-202ENST00000428154 SCARF1Q14162 830 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 SLFNL1Q499Z3 407 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 RALYLQ86SE5 291 aaKnown RBP23.62■■□□□ 1.37
PMPCB-202ENST00000428154 FAM200AQ8TCP9 573 aa23.62■■□□□ 1.37
PMPCB-202ENST00000428154 DDX11Q96FC9 970 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms