RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 USP17L1Q7RTZ2 530 aa23.3■■□□□ 1.32
PSPC1-202ENST00000427943 SSH1Q8WYL5 1049 aa23.3■■□□□ 1.32
PSPC1-202ENST00000427943 FBXW7Q969H0 707 aa23.3■■□□□ 1.32
PSPC1-202ENST00000427943 USP48Q86UV5 1035 aa23.29■■□□□ 1.32
PSPC1-202ENST00000427943 AGBL3Q8NEM8 1001 aa23.29■■□□□ 1.32
PSPC1-202ENST00000427943 HELBQ8NG08 1087 aaPredicted RBP23.29■■□□□ 1.32
PSPC1-202ENST00000427943 ZNF594Q96JF6 807 aaPredicted RBP23.29■■□□□ 1.32
PSPC1-202ENST00000427943 TLL2Q9Y6L7 1015 aa23.29■■□□□ 1.32
PSPC1-202ENST00000427943 WDR33Q9C0J8 1336 aaKnown RBP23.29■■□□□ 1.32
PSPC1-202ENST00000427943 SNAP23O00161 211 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 KCNJ4P48050 445 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 GRM1Q13255 1194 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 SUCLG2Q96I99 432 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 MXD3Q9BW11 206 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 COA1Q9GZY4 146 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 ASTN2O75129 1339 aaPredicted RBP23.28■■□□□ 1.32
PSPC1-202ENST00000427943 PTPRCP08575 1304 aa23.28■■□□□ 1.32
PSPC1-202ENST00000427943 TAF5LO75529 589 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 CCDC57Q2TAC2 916 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 TAF7LQ5H9L4 462 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 CYP4F22Q6NT55 531 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 GMLQ99445 158 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 GGA3Q9NZ52 723 aa23.27■■□□□ 1.32
PSPC1-202ENST00000427943 ADM5C9JUS6 153 aa23.26■■□□□ 1.31
PSPC1-202ENST00000427943 NBPF7P0C2Y1 421 aaPredicted RBP23.26■■□□□ 1.31
PSPC1-202ENST00000427943 ZNF280AP59817 542 aaPredicted RBP23.26■■□□□ 1.31
PSPC1-202ENST00000427943 KRT26Q7Z3Y9 468 aa23.26■■□□□ 1.31
PSPC1-202ENST00000427943 DCPSQ96C86 337 aaKnown RBP23.26■■□□□ 1.31
PSPC1-202ENST00000427943 CAPNS2Q96L46 248 aa23.26■■□□□ 1.31
PSPC1-202ENST00000427943 FOXN1O15353 648 aa23.25■■□□□ 1.31
PSPC1-202ENST00000427943 DACT2Q5SW24 774 aa23.25■■□□□ 1.31
PSPC1-202ENST00000427943 KAZALD1Q96I82 304 aa23.25■■□□□ 1.31
PSPC1-202ENST00000427943 USP17L8P0C7I0 530 aa23.24■■□□□ 1.31
PSPC1-202ENST00000427943 SAPCD2Q86UD0 394 aa23.24■■□□□ 1.31
PSPC1-202ENST00000427943 TRMT2AQ8IZ69 625 aaKnown RBP23.24■■□□□ 1.31
PSPC1-202ENST00000427943 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
PSPC1-202ENST00000427943 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
PSPC1-202ENST00000427943 ECE1P42892 770 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 STRIP1Q5VSL9 837 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 CNNM1Q9NRU3 951 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 UTYO14607 1347 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
PSPC1-202ENST00000427943 PLIN1O60240 522 aa23.22■■□□□ 1.31
PSPC1-202ENST00000427943 SCARF1Q14162 830 aa23.22■■□□□ 1.31
PSPC1-202ENST00000427943 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
PSPC1-202ENST00000427943 ANGEL2Q5VTE6 544 aaKnown RBP23.22■■□□□ 1.31
PSPC1-202ENST00000427943 AIDAQ96BJ3 306 aa23.22■■□□□ 1.31
PSPC1-202ENST00000427943 BICC1Q9H694 974 aaKnown RBP23.22■■□□□ 1.31
PSPC1-202ENST00000427943 ECM29Q5VYK3 1845 aa23.22■■□□□ 1.31
PSPC1-202ENST00000427943 SULF1Q8IWU6 871 aa23.21■■□□□ 1.31
PSPC1-202ENST00000427943 WBP1LQ9NX94 342 aa23.21■■□□□ 1.31
PSPC1-202ENST00000427943 MYO3BQ8WXR4 1341 aa23.2■■□□□ 1.3
PSPC1-202ENST00000427943 GTF2IP78347 998 aa23.2■■□□□ 1.3
PSPC1-202ENST00000427943 TTLL5Q6EMB2 1281 aa23.2■■□□□ 1.3
PSPC1-202ENST00000427943 CD209Q9NNX6 404 aa23.2■■□□□ 1.3
PSPC1-202ENST00000427943 ARAP2Q8WZ64 1704 aa23.19■■□□□ 1.3
PSPC1-202ENST00000427943 AOC2O75106 756 aa23.19■■□□□ 1.3
PSPC1-202ENST00000427943 PUS3Q9BZE2 481 aaKnown RBP23.19■■□□□ 1.3
PSPC1-202ENST00000427943 C15orf52Q6ZUT6 534 aaKnown RBP23.18■■□□□ 1.3
PSPC1-202ENST00000427943 ANKRD44Q8N8A2 993 aa23.18■■□□□ 1.3
PSPC1-202ENST00000427943 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
PSPC1-202ENST00000427943 HUNKP57058 714 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 MAP2K1Q02750 393 aaPredicted RBP23.17■■□□□ 1.3
PSPC1-202ENST00000427943 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 RABL6Q3YEC7 729 aaPredicted RBP23.17■■□□□ 1.3
PSPC1-202ENST00000427943 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 OGFOD1Q8N543 542 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 CDCA5Q96FF9 252 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 HHIPL1Q96JK4 782 aa23.17■■□□□ 1.3
PSPC1-202ENST00000427943 GBA2Q9HCG7 927 aaPredicted RBP23.17■■□□□ 1.3
PSPC1-202ENST00000427943 CTCFP49711 727 aaPredicted RBP23.16■■□□□ 1.3
PSPC1-202ENST00000427943 USP44Q9H0E7 712 aa23.16■■□□□ 1.3
PSPC1-202ENST00000427943 PITPNM2Q9BZ72 1349 aa23.15■■□□□ 1.3
PSPC1-202ENST00000427943 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
PSPC1-202ENST00000427943 SASH1O94885 1247 aa23.15■■□□□ 1.3
PSPC1-202ENST00000427943 CT47B1P0C2W7 299 aaPredicted RBP23.15■■□□□ 1.3
PSPC1-202ENST00000427943 MYH13Q9UKX3 1938 aa23.15■■□□□ 1.3
PSPC1-202ENST00000427943 CERS5Q8N5B7 392 aa23.14■■□□□ 1.29
PSPC1-202ENST00000427943 C2orf69Q8N8R5 385 aa23.14■■□□□ 1.29
PSPC1-202ENST00000427943 NOB1Q9ULX3 412 aaKnown RBP23.14■■□□□ 1.29
PSPC1-202ENST00000427943 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
PSPC1-202ENST00000427943 WNT10BO00744 389 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 IL1R1P14778 569 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 LBX1P52954 281 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 MIER1Q8N108 512 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 KLHDC4Q8TBB5 520 aa23.13■■□□□ 1.29
PSPC1-202ENST00000427943 HSPA8P11142 646 aaKnown RBP23.12■■□□□ 1.29
PSPC1-202ENST00000427943 HDAC9Q9UKV0 1011 aa23.12■■□□□ 1.29
PSPC1-202ENST00000427943 RIPOR2Q9Y4F9 1068 aa23.12■■□□□ 1.29
PSPC1-202ENST00000427943 MROH5Q6ZUA9 1318 aa23.11■■□□□ 1.29
PSPC1-202ENST00000427943 MAP2K2P36507 400 aa23.11■■□□□ 1.29
PSPC1-202ENST00000427943 GYG1P46976 350 aa23.11■■□□□ 1.29
PSPC1-202ENST00000427943 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
PSPC1-202ENST00000427943 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
PSPC1-202ENST00000427943 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
PSPC1-202ENST00000427943 RARSP54136 660 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms