RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
RTN4-210ENST00000427710 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
RTN4-210ENST00000427710 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 HIRAP54198 1017 aaPredicted RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 TBC1D10BQ4KMP7 808 aaPredicted RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 USP50Q70EL3 339 aaPredicted RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 SAMD7Q7Z3H4 446 aa18.66■□□□□ 0.58
RTN4-210ENST00000427710 CNTROBQ8N137 903 aa18.66■□□□□ 0.58
RTN4-210ENST00000427710 LRRFIP2Q9Y608 721 aaKnown RBP18.66■□□□□ 0.58
RTN4-210ENST00000427710 IRS2Q9Y4H2 1338 aa18.66■□□□□ 0.58
RTN4-210ENST00000427710 H7C1D1 291 aa18.65■□□□□ 0.58
RTN4-210ENST00000427710 ITGBL1O95965 494 aaPredicted RBP18.65■□□□□ 0.58
RTN4-210ENST00000427710 EGFRP00533 1210 aa18.65■□□□□ 0.58
RTN4-210ENST00000427710 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
RTN4-210ENST00000427710 RSBN1LQ6PCB5 846 aaPredicted RBP18.65■□□□□ 0.58
RTN4-210ENST00000427710 RIPOR2Q9Y4F9 1068 aa18.65■□□□□ 0.58
RTN4-210ENST00000427710 USP17L3A6NCW0 530 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 USP17L4A6NCW7 530 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
RTN4-210ENST00000427710 ZKSCAN2Q63HK3 967 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 USP17L1Q7RTZ2 530 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 PODNQ7Z5L7 613 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 DPF2Q92785 391 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 PASKQ96RG2 1323 aa18.64■□□□□ 0.57
RTN4-210ENST00000427710 DNAJC5GQ8N7S2 189 aa18.63■□□□□ 0.57
RTN4-210ENST00000427710 TRAF5O00463 557 aa18.62■□□□□ 0.57
RTN4-210ENST00000427710 RPS12P25398 132 aaKnown RBP18.62■□□□□ 0.57
RTN4-210ENST00000427710 METTL24Q5JXM2 366 aa18.62■□□□□ 0.57
RTN4-210ENST00000427710 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
RTN4-210ENST00000427710 JAG2Q9Y219 1238 aa18.62■□□□□ 0.57
RTN4-210ENST00000427710 GTF2IP78347 998 aa18.61■□□□□ 0.57
RTN4-210ENST00000427710 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
RTN4-210ENST00000427710 DACT2Q5SW24 774 aa18.61■□□□□ 0.57
RTN4-210ENST00000427710 GMLQ99445 158 aa18.61■□□□□ 0.57
RTN4-210ENST00000427710 SIL1Q9H173 461 aa18.61■□□□□ 0.57
RTN4-210ENST00000427710 PA2G4Q9UQ80 394 aaKnown RBP18.61■□□□□ 0.57
RTN4-210ENST00000427710 ASTN2O75129 1339 aaPredicted RBP18.6■□□□□ 0.57
RTN4-210ENST00000427710 MROH5Q6ZUA9 1318 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 RLBP1P12271 317 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 GYG1P46976 350 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 DLK2Q6UY11 383 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 C15orf52Q6ZUT6 534 aaKnown RBP18.6■□□□□ 0.57
RTN4-210ENST00000427710 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
RTN4-210ENST00000427710 MYH13Q9UKX3 1938 aa18.6■□□□□ 0.57
RTN4-210ENST00000427710 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
RTN4-210ENST00000427710 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
RTN4-210ENST00000427710 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
RTN4-210ENST00000427710 EYA2O00167 538 aa18.58■□□□□ 0.56
RTN4-210ENST00000427710 GNAI3P08754 354 aa18.58■□□□□ 0.56
RTN4-210ENST00000427710 STRIP1Q5VSL9 837 aa18.58■□□□□ 0.56
RTN4-210ENST00000427710 ZNF804AQ7Z570 1209 aa18.58■□□□□ 0.56
RTN4-210ENST00000427710 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
RTN4-210ENST00000427710 USP17L8P0C7I0 530 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 ZNF280AP59817 542 aaPredicted RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 USP48Q86UV5 1035 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 KLRG1Q96E93 195 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 FAM84BQ96KN1 310 aaPredicted RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 PGAP2Q9UHJ9 254 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 IQSEC3Q9UPP2 1182 aaPredicted RBP18.57■□□□□ 0.56
RTN4-210ENST00000427710 ZNF609O15014 1411 aa18.57■□□□□ 0.56
RTN4-210ENST00000427710 TMEM88BA6NKF7 163 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 PDE8BO95263 885 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 IL1R1P14778 569 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 KIAA0825Q8IV33 1275 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 ITPRIPQ8IWB1 547 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
RTN4-210ENST00000427710 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
RTN4-210ENST00000427710 GNAI2P04899 355 aa18.55■□□□□ 0.56
RTN4-210ENST00000427710 HIBADHP31937 336 aaKnown RBP18.55■□□□□ 0.56
RTN4-210ENST00000427710 SCARF1Q14162 830 aa18.55■□□□□ 0.56
RTN4-210ENST00000427710 CERS5Q8N5B7 392 aa18.55■□□□□ 0.56
RTN4-210ENST00000427710 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
RTN4-210ENST00000427710 ADM5C9JUS6 153 aa18.54■□□□□ 0.56
RTN4-210ENST00000427710 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
RTN4-210ENST00000427710 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
RTN4-210ENST00000427710 ZC3H15Q8WU90 426 aaKnown RBP18.54■□□□□ 0.56
RTN4-210ENST00000427710 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
RTN4-210ENST00000427710 GGA3Q9NZ52 723 aa18.54■□□□□ 0.56
RTN4-210ENST00000427710 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
RTN4-210ENST00000427710 FGFR2P21802 821 aa18.53■□□□□ 0.56
RTN4-210ENST00000427710 BCAMP50895 628 aa18.53■□□□□ 0.56
RTN4-210ENST00000427710 CST9Q5W186 159 aa18.53■□□□□ 0.56
RTN4-210ENST00000427710 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
RTN4-210ENST00000427710 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
RTN4-210ENST00000427710 PCDHAC2Q9Y5I4 1007 aa18.53■□□□□ 0.56
RTN4-210ENST00000427710 MYO3BQ8WXR4 1341 aa18.52■□□□□ 0.56
RTN4-210ENST00000427710 ARAP2Q8WZ64 1704 aa18.52■□□□□ 0.56
RTN4-210ENST00000427710 PCNTO95613 3336 aa18.52■□□□□ 0.56
RTN4-210ENST00000427710 ECM29Q5VYK3 1845 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms