RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ALG1Q9BT22 464 aa16.02■□□□□ 0.15
RPL28-202ENST00000426763 MAST3O60307 1309 aa16.02■□□□□ 0.15
RPL28-202ENST00000426763 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.15
RPL28-202ENST00000426763 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.15
RPL28-202ENST00000426763 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 LPIN2Q92539 896 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
RPL28-202ENST00000426763 UBA5Q9GZZ9 404 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
RPL28-202ENST00000426763 TRIM21P19474 475 aaKnown RBP16.01■□□□□ 0.15
RPL28-202ENST00000426763 UBA7P41226 1012 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 KCNQ3O43525 872 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 MBD4O95243 580 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 CHMLP26374 656 aa16.01■□□□□ 0.15
RPL28-202ENST00000426763 TFIP11Q9UBB9 837 aaKnown RBP16.01■□□□□ 0.15
RPL28-202ENST00000426763 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
RPL28-202ENST00000426763 BMP15O95972 392 aa16■□□□□ 0.15
RPL28-202ENST00000426763 DBNDD2Q9BQY9 259 aa16■□□□□ 0.15
RPL28-202ENST00000426763 CFAP100Q494V2 611 aa16■□□□□ 0.15
RPL28-202ENST00000426763 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
RPL28-202ENST00000426763 KLHDC4Q8TBB5 520 aa16■□□□□ 0.15
RPL28-202ENST00000426763 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
RPL28-202ENST00000426763 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
RPL28-202ENST00000426763 PPFIA3O75145 1194 aa16■□□□□ 0.15
RPL28-202ENST00000426763 ALDH1B1P30837 517 aa16■□□□□ 0.15
RPL28-202ENST00000426763 TEX11Q8IYF3 940 aa16■□□□□ 0.15
RPL28-202ENST00000426763 KLHL10Q6JEL2 608 aa16■□□□□ 0.15
RPL28-202ENST00000426763 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
RPL28-202ENST00000426763 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
RPL28-202ENST00000426763 AOX1Q06278 1338 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 CDR1P51861 262 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 DNAI2Q9GZS0 605 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 CERS3Q8IU89 383 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 FKBP15Q5T1M5 1219 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 ZNF397Q8NF99 534 aaPredicted RBP15.99■□□□□ 0.15
RPL28-202ENST00000426763 SAMM50Q9Y512 469 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 KDRP35968 1356 aa15.99■□□□□ 0.15
RPL28-202ENST00000426763 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 SIK1P57059 783 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 IBSPP21815 317 aaPredicted RBP15.98■□□□□ 0.15
RPL28-202ENST00000426763 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 ERBB3P21860 1342 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 DESP17661 470 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 PDE6BP35913 854 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 NAPAP54920 295 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 ERMNQ8TAM6 284 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
RPL28-202ENST00000426763 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
RPL28-202ENST00000426763 TAF5LO75529 589 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
RPL28-202ENST00000426763 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
RPL28-202ENST00000426763 RRP36Q96EU6 259 aaKnown RBP15.97■□□□□ 0.15
RPL28-202ENST00000426763 CTSWP56202 376 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 STXBP4Q6ZWJ1 553 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 FILIP1Q7Z7B0 1213 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
RPL28-202ENST00000426763 C6orf50Q9HD87 102 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 UNC13BO14795 1591 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
RPL28-202ENST00000426763 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
RPL28-202ENST00000426763 SMARCC2Q8TAQ2 1214 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 APPBP2Q92624 585 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 RXRBP28702 533 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 SH2D4AQ9H788 454 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 IDEP14735 1019 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 CALML3P27482 149 aa15.96■□□□□ 0.15
RPL28-202ENST00000426763 RPS8P62241 208 aaKnown RBP15.96■□□□□ 0.15
RPL28-202ENST00000426763 RNF17Q9BXT8 1623 aaKnown RBP15.95■□□□□ 0.14
RPL28-202ENST00000426763 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 CCDC102BQ68D86 513 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 B4DLN1 442 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 EPB41L2O43491 1005 aaKnown RBP15.95■□□□□ 0.14
RPL28-202ENST00000426763 MRPL12P52815 198 aaKnown RBP15.95■□□□□ 0.14
RPL28-202ENST00000426763 MPNDQ8N594 471 aa15.95■□□□□ 0.14
RPL28-202ENST00000426763 ERCC4Q92889 916 aaPredicted RBP15.95■□□□□ 0.14
RPL28-202ENST00000426763 UNC5CLQ8IV45 518 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 ZBTB38Q8NAP3 1195 aaPredicted RBP15.94■□□□□ 0.14
RPL28-202ENST00000426763 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 UBE2HP62256 183 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 HSP90B2PQ58FF3 399 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 CHST3Q7LGC8 479 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 SNX21Q969T3 373 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms