RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
GACAT3-201ENST00000426539 HUNKP57058 714 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 FLIIQ13045 1269 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 GCKRQ14397 625 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 DCPSQ96C86 337 aaKnown RBP12.88□□□□□ -0.35
GACAT3-201ENST00000426539 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 PLA2G12BQ9BX93 195 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
GACAT3-201ENST00000426539 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
GACAT3-201ENST00000426539 SCARF1Q14162 830 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 MXD3Q9BW11 206 aa12.87□□□□□ -0.35
GACAT3-201ENST00000426539 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
GACAT3-201ENST00000426539 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 CSF1RP07333 972 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 KLRK1P26718 216 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
GACAT3-201ENST00000426539 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 ANGEL2Q5VTE6 544 aaKnown RBP12.86□□□□□ -0.35
GACAT3-201ENST00000426539 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
GACAT3-201ENST00000426539 ITGA6P23229 1130 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 NOGQ13253 232 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
GACAT3-201ENST00000426539 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 SULF1Q8IWU6 871 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
GACAT3-201ENST00000426539 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
GACAT3-201ENST00000426539 F6X3S4 739 aa12.84□□□□□ -0.35
GACAT3-201ENST00000426539 ANP32CO43423 234 aa12.84□□□□□ -0.35
GACAT3-201ENST00000426539 CA12O43570 354 aa12.84□□□□□ -0.35
GACAT3-201ENST00000426539 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
GACAT3-201ENST00000426539 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
GACAT3-201ENST00000426539 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
GACAT3-201ENST00000426539 FOXO4P98177 505 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 KIF23Q02241 960 aaPredicted RBP12.83□□□□□ -0.36
GACAT3-201ENST00000426539 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.36
GACAT3-201ENST00000426539 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 PSME4Q14997 1843 aa12.83□□□□□ -0.36
GACAT3-201ENST00000426539 SNAP23O00161 211 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 SLC10A3P09131 477 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 ZNF157P51786 506 aaPredicted RBP12.82□□□□□ -0.36
GACAT3-201ENST00000426539 CHRNDQ07001 517 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 ZNF646O15015 1829 aaPredicted RBP12.82□□□□□ -0.36
GACAT3-201ENST00000426539 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
GACAT3-201ENST00000426539 EPHA10Q5JZY3 1008 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 MYH3P11055 1940 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
GACAT3-201ENST00000426539 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 WNT10BO00744 389 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
GACAT3-201ENST00000426539 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 CSRNP1Q96S65 589 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 RNF186Q9NXI6 227 aa12.8□□□□□ -0.36
GACAT3-201ENST00000426539 TAF5LO75529 589 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 SASH1O94885 1247 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 FKBP1BP68106 108 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 GTF2IP78347 998 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
GACAT3-201ENST00000426539 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
GACAT3-201ENST00000426539 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
GACAT3-201ENST00000426539 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
GACAT3-201ENST00000426539 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
GACAT3-201ENST00000426539 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 CERS5Q8N5B7 392 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
GACAT3-201ENST00000426539 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms