RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PDE4DIPQ5VU43 2346 aa18.92■□□□□ 0.62
PDAP1-202ENST00000426447 FKTNO75072 461 aa18.92■□□□□ 0.62
PDAP1-202ENST00000426447 WTIPA6NIX2 430 aaPredicted RBP18.91■□□□□ 0.62
PDAP1-202ENST00000426447 WNT10BO00744 389 aa18.91■□□□□ 0.62
PDAP1-202ENST00000426447 NOM1Q5C9Z4 860 aaKnown RBP18.91■□□□□ 0.62
PDAP1-202ENST00000426447 DACT2Q5SW24 774 aa18.91■□□□□ 0.62
PDAP1-202ENST00000426447 METTL22Q9BUU2 404 aaPredicted RBP18.91■□□□□ 0.62
PDAP1-202ENST00000426447 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
PDAP1-202ENST00000426447 MINPP1Q9UNW1 487 aa18.91■□□□□ 0.62
PDAP1-202ENST00000426447 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
PDAP1-202ENST00000426447 MYO3BQ8WXR4 1341 aa18.91■□□□□ 0.62
PDAP1-202ENST00000426447 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
PDAP1-202ENST00000426447 PTPN12Q05209 780 aaKnown RBP18.9■□□□□ 0.62
PDAP1-202ENST00000426447 STRIP1Q5VSL9 837 aa18.9■□□□□ 0.62
PDAP1-202ENST00000426447 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
PDAP1-202ENST00000426447 BSDC1Q9NW68 430 aaPredicted RBP18.9■□□□□ 0.62
PDAP1-202ENST00000426447 SASH1O94885 1247 aa18.89■□□□□ 0.61
PDAP1-202ENST00000426447 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
PDAP1-202ENST00000426447 CTSWP56202 376 aa18.89■□□□□ 0.61
PDAP1-202ENST00000426447 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.61
PDAP1-202ENST00000426447 MED23Q9ULK4 1368 aa18.89■□□□□ 0.61
PDAP1-202ENST00000426447 ALDH1A1P00352 501 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 MMP14P50281 582 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 GNAI1P63096 354 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
PDAP1-202ENST00000426447 TTLL5Q6EMB2 1281 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 APOBEC3FQ8IUX4 373 aaKnown RBP18.88■□□□□ 0.61
PDAP1-202ENST00000426447 TTLL11Q8NHH1 800 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 GCC1Q96CN9 775 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
PDAP1-202ENST00000426447 MAP3K2Q9Y2U5 619 aa18.88■□□□□ 0.61
PDAP1-202ENST00000426447 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 SLC10A4Q96EP9 437 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 R3HDMLQ9H3Y0 253 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 GREM2Q9H772 168 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 IFT57Q9NWB7 429 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 LEMD3Q9Y2U8 911 aa18.87■□□□□ 0.61
PDAP1-202ENST00000426447 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
PDAP1-202ENST00000426447 NEXNQ0ZGT2 675 aa18.86■□□□□ 0.61
PDAP1-202ENST00000426447 SPRYD7Q5W111 196 aa18.86■□□□□ 0.61
PDAP1-202ENST00000426447 KIAA0825Q8IV33 1275 aa18.86■□□□□ 0.61
PDAP1-202ENST00000426447 CFHR5Q9BXR6 569 aa18.86■□□□□ 0.61
PDAP1-202ENST00000426447 INHBEP58166 350 aa18.85■□□□□ 0.61
PDAP1-202ENST00000426447 C8orf58Q8NAV2 365 aa18.85■□□□□ 0.61
PDAP1-202ENST00000426447 TRIM17Q9Y577 477 aa18.85■□□□□ 0.61
PDAP1-202ENST00000426447 MANSC4A6NHS7 340 aaPredicted RBP18.84■□□□□ 0.61
PDAP1-202ENST00000426447 GTF2IP78347 998 aa18.84■□□□□ 0.61
PDAP1-202ENST00000426447 LDLRAD1Q5T700 205 aa18.84■□□□□ 0.61
PDAP1-202ENST00000426447 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
PDAP1-202ENST00000426447 TXNRD3Q86VQ6 643 aa18.84■□□□□ 0.61
PDAP1-202ENST00000426447 ZNF804BA4D1E1 1349 aa18.83■□□□□ 0.61
PDAP1-202ENST00000426447 PI4KAP2A4QPH2 592 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 KCNJ4P48050 445 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 DDX10Q13206 875 aaKnown RBP18.83■□□□□ 0.6
PDAP1-202ENST00000426447 PI4KAP1Q8N8J0 262 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 DEFB129Q9H1M3 183 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 FZD1Q9UP38 647 aa18.83■□□□□ 0.6
PDAP1-202ENST00000426447 APAF1O14727 1248 aa18.82■□□□□ 0.6
PDAP1-202ENST00000426447 IGKV5-2P06315 115 aa18.82■□□□□ 0.6
PDAP1-202ENST00000426447 DLGAP5Q15398 846 aa18.82■□□□□ 0.6
PDAP1-202ENST00000426447 INTS3Q68E01 1043 aaKnown RBP18.82■□□□□ 0.6
PDAP1-202ENST00000426447 IFNL1Q8IU54 200 aa18.82■□□□□ 0.6
PDAP1-202ENST00000426447 PPP1R12BO60237 982 aaPredicted RBP18.81■□□□□ 0.6
PDAP1-202ENST00000426447 CWF19L2Q2TBE0 894 aaKnown RBP18.81■□□□□ 0.6
PDAP1-202ENST00000426447 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
PDAP1-202ENST00000426447 PSME4Q14997 1843 aa18.81■□□□□ 0.6
PDAP1-202ENST00000426447 OTOP1Q7RTM1 612 aa18.8■□□□□ 0.6
PDAP1-202ENST00000426447 UBE3BQ7Z3V4 1068 aa18.8■□□□□ 0.6
PDAP1-202ENST00000426447 MYO1BO43795 1136 aa18.79■□□□□ 0.6
PDAP1-202ENST00000426447 ZBTB48P10074 688 aaPredicted RBP18.79■□□□□ 0.6
PDAP1-202ENST00000426447 ITGA6P23229 1130 aa18.79■□□□□ 0.6
PDAP1-202ENST00000426447 KLRK1P26718 216 aa18.79■□□□□ 0.6
PDAP1-202ENST00000426447 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
PDAP1-202ENST00000426447 OTUD7BQ6GQQ9 843 aa18.79■□□□□ 0.6
PDAP1-202ENST00000426447 ZBED3Q96IU2 234 aaPredicted RBP18.79■□□□□ 0.6
PDAP1-202ENST00000426447 POTEFA5A3E0 1075 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 H7C1W4 665 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 HABP4Q5JVS0 413 aaKnown RBP18.78■□□□□ 0.6
PDAP1-202ENST00000426447 TSPYL6Q8N831 410 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 CLMNQ96JQ2 1002 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 CD209Q9NNX6 404 aa18.78■□□□□ 0.6
PDAP1-202ENST00000426447 F8W031 263 aaPredicted RBP18.77■□□□□ 0.6
PDAP1-202ENST00000426447 MAP3K11Q16584 847 aa18.77■□□□□ 0.6
PDAP1-202ENST00000426447 PPP2R3BQ9Y5P8 575 aa18.77■□□□□ 0.6
PDAP1-202ENST00000426447 IGF2BP3O00425 579 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDAP1-202ENST00000426447 CHRNDQ07001 517 aa18.76■□□□□ 0.59
PDAP1-202ENST00000426447 VEZTQ9HBM0 779 aa18.76■□□□□ 0.59
PDAP1-202ENST00000426447 PTPN22Q9Y2R2 807 aa18.76■□□□□ 0.59
PDAP1-202ENST00000426447 CLRN2A0PK11 232 aa18.75■□□□□ 0.59
PDAP1-202ENST00000426447 UNCXA6NJT0 531 aa18.75■□□□□ 0.59
PDAP1-202ENST00000426447 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
PDAP1-202ENST00000426447 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDAP1-202ENST00000426447 CD99L2Q8TCZ2 262 aa18.75■□□□□ 0.59
PDAP1-202ENST00000426447 EFCC1Q9HA90 598 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms