RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PRKG1Q13976 671 aa18.46■□□□□ 0.55
HDAC6-206ENST00000426196 APOBEC3FQ8IUX4 373 aaKnown RBP18.46■□□□□ 0.55
HDAC6-206ENST00000426196 ZNF646O15015 1829 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-206ENST00000426196 HOXB7P09629 217 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 IFNL1Q8IU54 200 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 ERO1AQ96HE7 468 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 HYPKQ9NX55 129 aa18.45■□□□□ 0.54
HDAC6-206ENST00000426196 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
HDAC6-206ENST00000426196 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
HDAC6-206ENST00000426196 MMP14P50281 582 aa18.44■□□□□ 0.54
HDAC6-206ENST00000426196 LDLRAD1Q5T700 205 aa18.44■□□□□ 0.54
HDAC6-206ENST00000426196 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
HDAC6-206ENST00000426196 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
HDAC6-206ENST00000426196 CHL1O00533 1208 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 SASH1O94885 1247 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
HDAC6-206ENST00000426196 DACT2Q5SW24 774 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 SLC10A4Q96EP9 437 aa18.43■□□□□ 0.54
HDAC6-206ENST00000426196 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
HDAC6-206ENST00000426196 COL1A1P02452 1464 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-206ENST00000426196 PDE8AO60658 829 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-206ENST00000426196 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-206ENST00000426196 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 STRIP1Q5VSL9 837 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-206ENST00000426196 TMEM106CQ9BVX2 250 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 MXD3Q9BW11 206 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 MYH3P11055 1940 aa18.42■□□□□ 0.54
HDAC6-206ENST00000426196 CD99L2Q8TCZ2 262 aa18.41■□□□□ 0.54
HDAC6-206ENST00000426196 CDC5LQ99459 802 aaKnown RBP18.41■□□□□ 0.54
HDAC6-206ENST00000426196 EFCC1Q9HA90 598 aa18.41■□□□□ 0.54
HDAC6-206ENST00000426196 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-206ENST00000426196 ECM29Q5VYK3 1845 aa18.4■□□□□ 0.54
HDAC6-206ENST00000426196 IGF2BP3O00425 579 aaKnown RBP eCLIP18.4■□□□□ 0.54
HDAC6-206ENST00000426196 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-206ENST00000426196 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
HDAC6-206ENST00000426196 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
HDAC6-206ENST00000426196 WNK4Q96J92 1243 aa18.4■□□□□ 0.54
HDAC6-206ENST00000426196 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-206ENST00000426196 RANBP2P49792 3224 aaKnown RBP18.4■□□□□ 0.54
HDAC6-206ENST00000426196 PPP1R12BO60237 982 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-206ENST00000426196 MYD88Q99836 296 aa18.39■□□□□ 0.53
HDAC6-206ENST00000426196 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
HDAC6-206ENST00000426196 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
HDAC6-206ENST00000426196 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
HDAC6-206ENST00000426196 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-206ENST00000426196 A0A0C4DFX4 3053 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
HDAC6-206ENST00000426196 SP3Q02447 781 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 CRHR2Q13324 411 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 KIAA0825Q8IV33 1275 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 DEFB129Q9H1M3 183 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
HDAC6-206ENST00000426196 UNCXA6NJT0 531 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 CLMNQ96JQ2 1002 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-206ENST00000426196 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
HDAC6-206ENST00000426196 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-206ENST00000426196 CTSWP56202 376 aa18.35■□□□□ 0.53
HDAC6-206ENST00000426196 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
HDAC6-206ENST00000426196 SLC9C1Q4G0N8 1177 aa18.35■□□□□ 0.53
HDAC6-206ENST00000426196 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-206ENST00000426196 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-206ENST00000426196 ZNF333Q96JL9 665 aa18.35■□□□□ 0.53
HDAC6-206ENST00000426196 PPP2R3BQ9Y5P8 575 aa18.35■□□□□ 0.53
HDAC6-206ENST00000426196 DLGAP5Q15398 846 aa18.34■□□□□ 0.53
HDAC6-206ENST00000426196 SLC4A8Q2Y0W8 1093 aa18.34■□□□□ 0.53
HDAC6-206ENST00000426196 SSC5DA1L4H1 1573 aa18.34■□□□□ 0.53
HDAC6-206ENST00000426196 IREB2P48200 963 aaKnown RBP18.33■□□□□ 0.52
HDAC6-206ENST00000426196 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.52
HDAC6-206ENST00000426196 LEMD3Q9Y2U8 911 aa18.33■□□□□ 0.52
HDAC6-206ENST00000426196 COL6A3P12111 3177 aa18.32■□□□□ 0.52
HDAC6-206ENST00000426196 GTF2IP78347 998 aa18.32■□□□□ 0.52
HDAC6-206ENST00000426196 PHAXQ9H814 394 aaKnown RBP18.32■□□□□ 0.52
HDAC6-206ENST00000426196 H0YGN5 161 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 MYO1BO43795 1136 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 DDX58O95786 925 aaKnown RBP18.31■□□□□ 0.52
HDAC6-206ENST00000426196 TXNRD3Q86VQ6 643 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 GREM2Q9H772 168 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 OTOFQ9HC10 1997 aa18.31■□□□□ 0.52
HDAC6-206ENST00000426196 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 ANKRD13AQ8IZ07 590 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-206ENST00000426196 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 CUL9Q8IWT3 2517 aa18.3■□□□□ 0.52
HDAC6-206ENST00000426196 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-206ENST00000426196 GJA5P36382 358 aa18.29■□□□□ 0.52
HDAC6-206ENST00000426196 IGHMBP2P38935 993 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms