RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
SNX3-204ENST00000426155 PLIN1O60240 522 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 KCNJ4P48050 445 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
SNX3-204ENST00000426155 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
SNX3-204ENST00000426155 ZBTB22O15209 634 aa17.11■□□□□ 0.33
SNX3-204ENST00000426155 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
SNX3-204ENST00000426155 APLP1P51693 650 aa17.11■□□□□ 0.33
SNX3-204ENST00000426155 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
SNX3-204ENST00000426155 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
SNX3-204ENST00000426155 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
SNX3-204ENST00000426155 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SNX3-204ENST00000426155 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
SNX3-204ENST00000426155 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
SNX3-204ENST00000426155 EGFRP00533 1210 aa17.1■□□□□ 0.33
SNX3-204ENST00000426155 LRRC24Q50LG9 513 aa17.1■□□□□ 0.33
SNX3-204ENST00000426155 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
SNX3-204ENST00000426155 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
SNX3-204ENST00000426155 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
SNX3-204ENST00000426155 VIL1P09327 827 aaKnown RBP17.09■□□□□ 0.33
SNX3-204ENST00000426155 HIRAP54198 1017 aaPredicted RBP17.09■□□□□ 0.33
SNX3-204ENST00000426155 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNX3-204ENST00000426155 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
SNX3-204ENST00000426155 USP50Q70EL3 339 aaPredicted RBP17.09■□□□□ 0.33
SNX3-204ENST00000426155 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
SNX3-204ENST00000426155 ARAP2Q8WZ64 1704 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
SNX3-204ENST00000426155 ITGBL1O95965 494 aaPredicted RBP17.08■□□□□ 0.32
SNX3-204ENST00000426155 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
SNX3-204ENST00000426155 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
SNX3-204ENST00000426155 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 PODNQ7Z5L7 613 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 COA1Q9GZY4 146 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 RIPOR2Q9Y4F9 1068 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
SNX3-204ENST00000426155 ZNF609O15014 1411 aa17.07■□□□□ 0.32
SNX3-204ENST00000426155 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
SNX3-204ENST00000426155 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
SNX3-204ENST00000426155 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
SNX3-204ENST00000426155 DPF2Q92785 391 aa17.07■□□□□ 0.32
SNX3-204ENST00000426155 USP17L3A6NCW0 530 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 USP17L4A6NCW7 530 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 H7C1D1 291 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 RLBP1P12271 317 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
SNX3-204ENST00000426155 USP17L1Q7RTZ2 530 aa17.06■□□□□ 0.32
SNX3-204ENST00000426155 MROH5Q6ZUA9 1318 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 TRAF5O00463 557 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
SNX3-204ENST00000426155 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 C15orf52Q6ZUT6 534 aaKnown RBP17.05■□□□□ 0.32
SNX3-204ENST00000426155 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 GMLQ99445 158 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 SIL1Q9H173 461 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
SNX3-204ENST00000426155 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
SNX3-204ENST00000426155 GYG1P46976 350 aa17.04■□□□□ 0.32
SNX3-204ENST00000426155 GTF2IP78347 998 aa17.04■□□□□ 0.32
SNX3-204ENST00000426155 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
SNX3-204ENST00000426155 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
SNX3-204ENST00000426155 GNAI3P08754 354 aa17.03■□□□□ 0.32
SNX3-204ENST00000426155 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
SNX3-204ENST00000426155 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
SNX3-204ENST00000426155 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
SNX3-204ENST00000426155 AGBL3Q8NEM8 1001 aa17.03■□□□□ 0.32
SNX3-204ENST00000426155 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
SNX3-204ENST00000426155 EYA2O00167 538 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 UBE4AQ14139 1066 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 ATG9AQ7Z3C6 839 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 ZNF804AQ7Z570 1209 aa17.02■□□□□ 0.32
SNX3-204ENST00000426155 ECM29Q5VYK3 1845 aa17.02■□□□□ 0.31
SNX3-204ENST00000426155 PDE8BO95263 885 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 USP17L8P0C7I0 530 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 IL1R1P14778 569 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
SNX3-204ENST00000426155 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
SNX3-204ENST00000426155 CERS5Q8N5B7 392 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 PGAP2Q9UHJ9 254 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 PCNTO95613 3336 aa17.01■□□□□ 0.31
SNX3-204ENST00000426155 SRGAP3O43295 1099 aa17■□□□□ 0.31
SNX3-204ENST00000426155 KIAA0825Q8IV33 1275 aa17■□□□□ 0.31
SNX3-204ENST00000426155 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
SNX3-204ENST00000426155 MYOZ2Q9NPC6 264 aa17■□□□□ 0.31
SNX3-204ENST00000426155 GGA3Q9NZ52 723 aa17■□□□□ 0.31
SNX3-204ENST00000426155 IQSEC3Q9UPP2 1182 aaPredicted RBP17■□□□□ 0.31
SNX3-204ENST00000426155 TMEM88BA6NKF7 163 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms