RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TAF5LO75529 589 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 HSPA1AP0DMV8 641 aaKnown RBP21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 HSPA1BP0DMV9 641 aaKnown RBP21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 DEFB115Q30KQ5 88 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 RSBN1LQ6PCB5 846 aaPredicted RBP21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 AGBL3Q8NEM8 1001 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 HELBQ8NG08 1087 aaPredicted RBP21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 TRPM4Q8TD43 1214 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 ABT1Q9ULW3 272 aaKnown RBP21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 TRPM7Q96QT4 1865 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 TRAF5O00463 557 aa21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 IPO8O15397 1037 aaKnown RBP21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 VEGFBP49765 207 aa21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 TXNRD3Q86VQ6 643 aa21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 ZNF609O15014 1411 aa21.95■■□□□ 1.1
SLC6A1-202ENST00000425938 PLIN1O60240 522 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 KLRK1P26718 216 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 FMR1Q06787 632 aaKnown RBP eCLIP21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 TBC1D10BQ4KMP7 808 aaPredicted RBP21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 SAMD7Q7Z3H4 446 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 FBXW7Q969H0 707 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 HDAC5Q9UQL6 1122 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 POLR2AP24928 1970 aaKnown RBP21.94■■□□□ 1.1
SLC6A1-202ENST00000425938 UBTFL1P0CB47 393 aaPredicted RBP21.93■■□□□ 1.1
SLC6A1-202ENST00000425938 CST9Q5W186 159 aa21.93■■□□□ 1.1
SLC6A1-202ENST00000425938 CDC37L1Q7L3B6 337 aa21.93■■□□□ 1.1
SLC6A1-202ENST00000425938 RBM26Q5T8P6 1007 aaKnown RBP21.92■■□□□ 1.1
SLC6A1-202ENST00000425938 STRIP1Q5VSL9 837 aa21.92■■□□□ 1.1
SLC6A1-202ENST00000425938 C15orf52Q6ZUT6 534 aaKnown RBP21.92■■□□□ 1.1
SLC6A1-202ENST00000425938 GLIS2Q9BZE0 524 aaPredicted RBP21.92■■□□□ 1.1
SLC6A1-202ENST00000425938 MROH5Q6ZUA9 1318 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 MYO3BQ8WXR4 1341 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 SNAP23O00161 211 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 USP17L8P0C7I0 530 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 KIF4BQ2VIQ3 1234 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 ZNF804AQ7Z570 1209 aa21.91■■□□□ 1.1
SLC6A1-202ENST00000425938 ZNF280AP59817 542 aaPredicted RBP21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 DACT2Q5SW24 774 aa21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 TTLL5Q6EMB2 1281 aa21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 FRAT1Q92837 279 aaPredicted RBP21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 GMLQ99445 158 aa21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 PUS3Q9BZE2 481 aaKnown RBP21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 CD209Q9NNX6 404 aa21.9■■□□□ 1.1
SLC6A1-202ENST00000425938 BCAR3O75815 825 aa21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 CELF2O95319 508 aaKnown RBP21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 EGFRP00533 1210 aa21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 UBE4AQ14139 1066 aa21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 TLL2Q9Y6L7 1015 aa21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 ZNF646O15015 1829 aaPredicted RBP21.89■■□□□ 1.09
SLC6A1-202ENST00000425938 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 IRS2Q9Y4H2 1338 aa21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 METTL24Q5JXM2 366 aa21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 COL13A1Q5TAT6 717 aaPredicted RBP21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 INTS3Q68E01 1043 aaKnown RBP21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 OGFOD1Q8N543 542 aa21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 DCPSQ96C86 337 aaKnown RBP21.88■■□□□ 1.09
SLC6A1-202ENST00000425938 TRIM27P14373 513 aa21.87■■□□□ 1.09
SLC6A1-202ENST00000425938 ECE1P42892 770 aa21.87■■□□□ 1.09
SLC6A1-202ENST00000425938 GTF2IP78347 998 aa21.87■■□□□ 1.09
SLC6A1-202ENST00000425938 USP48Q86UV5 1035 aa21.87■■□□□ 1.09
SLC6A1-202ENST00000425938 MYOZ2Q9NPC6 264 aa21.87■■□□□ 1.09
SLC6A1-202ENST00000425938 MMP14P50281 582 aa21.86■■□□□ 1.09
SLC6A1-202ENST00000425938 LRRC24Q50LG9 513 aa21.86■■□□□ 1.09
SLC6A1-202ENST00000425938 KLHDC4Q8TBB5 520 aa21.86■■□□□ 1.09
SLC6A1-202ENST00000425938 MXD3Q9BW11 206 aa21.86■■□□□ 1.09
SLC6A1-202ENST00000425938 GNAI3P08754 354 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 IL1R1P14778 569 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 ZKSCAN2Q63HK3 967 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 PAXIP1Q6ZW49 1069 aaPredicted RBP21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 KRT26Q7Z3Y9 468 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 SAPCD2Q86UD0 394 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 AIDAQ96BJ3 306 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 CAPNS2Q96L46 248 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 MEIS3Q99687 375 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 ZNF408Q9H9D4 720 aa21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
SLC6A1-202ENST00000425938 WBP1LQ9NX94 342 aa21.84■■□□□ 1.09
SLC6A1-202ENST00000425938 GGA3Q9NZ52 723 aa21.84■■□□□ 1.09
SLC6A1-202ENST00000425938 HDAC9Q9UKV0 1011 aa21.84■■□□□ 1.09
SLC6A1-202ENST00000425938 EYA2O00167 538 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 PDE8BO95263 885 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 HIBADHP31937 336 aaKnown RBP21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 MAP2K1Q02750 393 aaPredicted RBP21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 SCARF1Q14162 830 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 CYP4F22Q6NT55 531 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 SULF1Q8IWU6 871 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 HHIPL1Q96JK4 782 aa21.83■■□□□ 1.09
SLC6A1-202ENST00000425938 FOXN1O15353 648 aa21.82■■□□□ 1.08
SLC6A1-202ENST00000425938 VPS37DQ86XT2 251 aa21.82■■□□□ 1.08
SLC6A1-202ENST00000425938 KIAA0825Q8IV33 1275 aa21.82■■□□□ 1.08
SLC6A1-202ENST00000425938 GYG1P46976 350 aa21.81■■□□□ 1.08
SLC6A1-202ENST00000425938 PTPN12Q05209 780 aaKnown RBP21.81■■□□□ 1.08
SLC6A1-202ENST00000425938 ANGEL2Q5VTE6 544 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms