RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
ATG4B-209ENST00000425239 PITPNM2Q9BZ72 1349 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 G3V3G9 751 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
ATG4B-209ENST00000425239 DGKZQ13574 1117 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 DCAF8Q5TAQ9 597 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 CDC5LQ99459 802 aaKnown RBP19.28■□□□□ 0.68
ATG4B-209ENST00000425239 MXD3Q9BW11 206 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
ATG4B-209ENST00000425239 CSF1RP07333 972 aa19.27■□□□□ 0.68
ATG4B-209ENST00000425239 NBPF9Q3BBW0 867 aa19.27■□□□□ 0.68
ATG4B-209ENST00000425239 SCAF8Q9UPN6 1271 aaKnown RBP19.27■□□□□ 0.68
ATG4B-209ENST00000425239 SPEF2Q9C093 1822 aa19.26■□□□□ 0.67
ATG4B-209ENST00000425239 TRPA1O75762 1119 aa19.26■□□□□ 0.67
ATG4B-209ENST00000425239 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
ATG4B-209ENST00000425239 FKBP1BP68106 108 aa19.26■□□□□ 0.67
ATG4B-209ENST00000425239 TWISTNBQ3B726 338 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-209ENST00000425239 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
ATG4B-209ENST00000425239 RASAL3Q86YV0 1011 aa19.26■□□□□ 0.67
ATG4B-209ENST00000425239 MLLT1Q03111 559 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-209ENST00000425239 GCKRQ14397 625 aa19.25■□□□□ 0.67
ATG4B-209ENST00000425239 STRIP1Q5VSL9 837 aa19.25■□□□□ 0.67
ATG4B-209ENST00000425239 MOB2Q70IA6 237 aa19.25■□□□□ 0.67
ATG4B-209ENST00000425239 AKAP11Q9UKA4 1901 aa19.25■□□□□ 0.67
ATG4B-209ENST00000425239 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
ATG4B-209ENST00000425239 WNT10BO00744 389 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 KLRK1P26718 216 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 PRAMEF18Q5VWM3 479 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 UBE3BQ7Z3V4 1068 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 LEMD3Q9Y2U8 911 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 PAPPA2Q9BXP8 1791 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 IL16Q14005 1332 aa19.24■□□□□ 0.67
ATG4B-209ENST00000425239 NEXNQ0ZGT2 675 aa19.23■□□□□ 0.67
ATG4B-209ENST00000425239 ZBED3Q96IU2 234 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-209ENST00000425239 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
ATG4B-209ENST00000425239 ITGA6P23229 1130 aa19.22■□□□□ 0.67
ATG4B-209ENST00000425239 FLIIQ13045 1269 aa19.22■□□□□ 0.67
ATG4B-209ENST00000425239 UBE2Q2LH0YL09 131 aa19.21■□□□□ 0.67
ATG4B-209ENST00000425239 VAMP4O75379 141 aa19.21■□□□□ 0.67
ATG4B-209ENST00000425239 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-209ENST00000425239 ZNF804BA4D1E1 1349 aa19.21■□□□□ 0.67
ATG4B-209ENST00000425239 MYO3BQ8WXR4 1341 aa19.2■□□□□ 0.66
ATG4B-209ENST00000425239 CACNA1FO60840 1977 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 SNAP23O00161 211 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 MMP14P50281 582 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 FOXO4P98177 505 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 LINS1Q8NG48 757 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 DNAAF4Q8WXU2 420 aa19.19■□□□□ 0.66
ATG4B-209ENST00000425239 IGHMBP2P38935 993 aaKnown RBP19.18■□□□□ 0.66
ATG4B-209ENST00000425239 TM4SF4P48230 202 aa19.18■□□□□ 0.66
ATG4B-209ENST00000425239 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
ATG4B-209ENST00000425239 ANKRD2Q9GZV1 360 aa19.18■□□□□ 0.66
ATG4B-209ENST00000425239 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
ATG4B-209ENST00000425239 SLC34A2O95436 690 aa19.17■□□□□ 0.66
ATG4B-209ENST00000425239 CHRNDQ07001 517 aa19.17■□□□□ 0.66
ATG4B-209ENST00000425239 C15orf52Q6ZUT6 534 aaKnown RBP19.17■□□□□ 0.66
ATG4B-209ENST00000425239 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
ATG4B-209ENST00000425239 CD209Q9NNX6 404 aa19.17■□□□□ 0.66
ATG4B-209ENST00000425239 HTTP42858 3142 aa19.16■□□□□ 0.66
ATG4B-209ENST00000425239 CENPFP49454 3210 aa19.16■□□□□ 0.66
ATG4B-209ENST00000425239 SASH1O94885 1247 aa19.16■□□□□ 0.66
ATG4B-209ENST00000425239 GTF2IP78347 998 aa19.16■□□□□ 0.66
ATG4B-209ENST00000425239 LDLRAD1Q5T700 205 aa19.16■□□□□ 0.66
ATG4B-209ENST00000425239 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-209ENST00000425239 PTPN12Q05209 780 aaKnown RBP19.15■□□□□ 0.66
ATG4B-209ENST00000425239 FKBP5Q13451 457 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-209ENST00000425239 BEND3Q5T5X7 828 aa19.15■□□□□ 0.66
ATG4B-209ENST00000425239 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
ATG4B-209ENST00000425239 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
ATG4B-209ENST00000425239 MPHOSPH8Q99549 860 aa19.15■□□□□ 0.66
ATG4B-209ENST00000425239 A0A1B0GUL6 1792 aa19.14■□□□□ 0.66
ATG4B-209ENST00000425239 TAF5LO75529 589 aa19.14■□□□□ 0.65
ATG4B-209ENST00000425239 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
ATG4B-209ENST00000425239 EPHA10Q5JZY3 1008 aa19.14■□□□□ 0.65
ATG4B-209ENST00000425239 CTU1Q7Z7A3 348 aaKnown RBP19.14■□□□□ 0.65
ATG4B-209ENST00000425239 MTMR14Q8NCE2 650 aa19.14■□□□□ 0.65
ATG4B-209ENST00000425239 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
ATG4B-209ENST00000425239 MKI67P46013 3256 aaKnown RBP19.13■□□□□ 0.65
ATG4B-209ENST00000425239 BRCA2P51587 3418 aa19.13■□□□□ 0.65
ATG4B-209ENST00000425239 F6X3S4 739 aa19.13■□□□□ 0.65
ATG4B-209ENST00000425239 TBC1D8O95759 1140 aa19.13■□□□□ 0.65
ATG4B-209ENST00000425239 HELBQ8NG08 1087 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-209ENST00000425239 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
ATG4B-209ENST00000425239 PCDHAC2Q9Y5I4 1007 aa19.13■□□□□ 0.65
ATG4B-209ENST00000425239 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
ATG4B-209ENST00000425239 IL1R1P14778 569 aa19.12■□□□□ 0.65
ATG4B-209ENST00000425239 NOM1Q5C9Z4 860 aaKnown RBP19.12■□□□□ 0.65
ATG4B-209ENST00000425239 ZNF296Q8WUU4 475 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-209ENST00000425239 CFHR5Q9BXR6 569 aa19.12■□□□□ 0.65
ATG4B-209ENST00000425239 R3HDMLQ9H3Y0 253 aa19.12■□□□□ 0.65
ATG4B-209ENST00000425239 FZD1Q9UP38 647 aa19.12■□□□□ 0.65
ATG4B-209ENST00000425239 AOX1Q06278 1338 aa19.11■□□□□ 0.65
ATG4B-209ENST00000425239 MAP3K11Q16584 847 aa19.11■□□□□ 0.65
ATG4B-209ENST00000425239 APOBEC3FQ8IUX4 373 aaKnown RBP19.1■□□□□ 0.65
ATG4B-209ENST00000425239 DEFB129Q9H1M3 183 aa19.1■□□□□ 0.65
ATG4B-209ENST00000425239 HDAC9Q9UKV0 1011 aa19.1■□□□□ 0.65
ATG4B-209ENST00000425239 SSC5DA1L4H1 1573 aa19.1■□□□□ 0.65
ATG4B-209ENST00000425239 SOX10P56693 466 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms