RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 FDPSP14324 419 aaKnown RBP16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
TPM3P9-201ENST00000424846 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.26
TPM3P9-201ENST00000424846 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 CYP27B1O15528 508 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 HSPD1P10809 573 aaKnown RBP16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 FOXO4P98177 505 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 ANKLE2Q86XL3 938 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 CAMTA1Q9Y6Y1 1673 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 A0A1B0GVL5 298 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 ME1P48163 572 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 MAST3O60307 1309 aa16.64■□□□□ 0.25
TPM3P9-201ENST00000424846 STX1AQ16623 288 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 HSP90AB3PQ58FF7 597 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 SCN11AQ9UI33 1791 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 M0R2C6 588 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 HAND2P61296 217 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 CCZ1BP86790 482 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 SKILP12757 684 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 SARM1Q6SZW1 724 aa16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
TPM3P9-201ENST00000424846 CCDC69A6NI79 296 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 NBPF14Q5TI25 921 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 CEP135Q66GS9 1140 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 LLPHQ9BRT6 129 aaKnown RBP16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 BECN2A8MW95 431 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 CDC25BP30305 580 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 ZMYM1Q5SVZ6 1142 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
TPM3P9-201ENST00000424846 FOXP2O15409 715 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 KINO60870 393 aaKnown RBP16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 CLIC4Q9Y696 253 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 NDUFA8P51970 172 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
TPM3P9-201ENST00000424846 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 DPCR1Q3MIW9 517 aa16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 NEDD4P46934 1319 aa16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 RFX7Q2KHR2 1363 aa16.6■□□□□ 0.25
TPM3P9-201ENST00000424846 BIN1O00499 593 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 NYAP1Q6ZVC0 841 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
TPM3P9-201ENST00000424846 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.25
TPM3P9-201ENST00000424846 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 H7C1W4 665 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 ADORA1P30542 326 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 ANO10Q9NW15 660 aa16.58■□□□□ 0.24
TPM3P9-201ENST00000424846 CTAGE5O15320 804 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 A1BGP04217 495 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 SCARF1Q14162 830 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms