RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 OSGEPQ9NPF4 335 aa4.62□□□□□ -1.67
PMS1-209ENST00000424059 LINC01387J3KSC0 135 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 IGLV1-40P01703 118 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 GLB1P16278 677 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 CABP4P57796 275 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 PIP4K2BP78356 416 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 ATP11AP98196 1134 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 NAA30Q147X3 362 aaPredicted RBP4.61□□□□□ -1.67
PMS1-209ENST00000424059 CEP120Q8N960 986 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 ELP3Q9H9T3 547 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 SEC31BQ9NQW1 1179 aa4.61□□□□□ -1.67
PMS1-209ENST00000424059 H3BRJ5 948 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 FSCN2O14926 492 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 EIF4EBP3O60516 100 aaPredicted RBP4.6□□□□□ -1.67
PMS1-209ENST00000424059 ALX3O95076 343 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 ALKBH2Q6NS38 261 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 ACAD11Q709F0 780 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 ZNF438Q7Z4V0 828 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 RASSF4Q9H2L5 321 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 NCAPG2Q86XI2 1143 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 GALNT11Q8NCW6 608 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 TTC16Q8NEE8 873 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 FAM46AQ96IP4 442 aaKnown RBP4.6□□□□□ -1.67
PMS1-209ENST00000424059 LACRTQ9GZZ8 138 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 HIF3AQ9Y2N7 669 aa4.6□□□□□ -1.67
PMS1-209ENST00000424059 TM4SF5O14894 197 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 MZF1P28698 734 aaPredicted RBP4.59□□□□□ -1.67
PMS1-209ENST00000424059 NOM1Q5C9Z4 860 aaKnown RBP4.59□□□□□ -1.67
PMS1-209ENST00000424059 ANKRD34AQ69YU3 496 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 CAPN12Q6ZSI9 719 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 NUDT16Q96DE0 195 aaKnown RBP4.59□□□□□ -1.67
PMS1-209ENST00000424059 PCMTD2Q9NV79 361 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 STOML1Q9UBI4 398 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 SALL4Q9UJQ4 1053 aa4.59□□□□□ -1.67
PMS1-209ENST00000424059 KIAA1324LA8MWY0 1029 aaPredicted RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 CD97P48960 835 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 DUOXA2Q1HG44 320 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 INTS5Q6P9B9 1019 aaKnown RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 AGGF1Q8N302 714 aaeCLIP4.58□□□□□ -1.68
PMS1-209ENST00000424059 UBL7Q96S82 380 aaPredicted RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 MTMR7Q9Y216 660 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 ZBTB39O15060 712 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 PPP1R15AO75807 674 aaPredicted RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 WISP1O95388 367 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 PDGFAP04085 211 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 GRIK1P39086 918 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 ARL4DP49703 201 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 EHHADHQ08426 723 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 KIAA1211Q6ZU35 1233 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 TMEM102Q8N9M5 508 aaPredicted RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 UTP4Q969X6 686 aaKnown RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 MYRFLQ96LU7 910 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 POP1Q99575 1024 aaKnown RBP4.58□□□□□ -1.68
PMS1-209ENST00000424059 TMEM63CQ9P1W3 806 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 SLAIN2Q9P270 581 aa4.58□□□□□ -1.68
PMS1-209ENST00000424059 CYP2E1P05181 493 aaPredicted RBP4.57□□□□□ -1.68
PMS1-209ENST00000424059 NPR3P17342 541 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 EPHA1P21709 976 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 CES1P23141 567 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 ARMC10Q8N2F6 343 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 EDEM1Q92611 657 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 RNF208Q9H0X6 261 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 SEPT3Q9UH03 358 aa4.57□□□□□ -1.68
PMS1-209ENST00000424059 MEGF11A6BM72 1044 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 PDE2AO00408 941 aaPredicted RBP4.56□□□□□ -1.68
PMS1-209ENST00000424059 RNF43Q68DV7 783 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 MCTP1Q6DN14 999 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.56□□□□□ -1.68
PMS1-209ENST00000424059 CLEC10AQ8IUN9 316 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 FAM9AQ8IZU1 332 aaPredicted RBP4.56□□□□□ -1.68
PMS1-209ENST00000424059 FOXD4L4Q8WXT5 416 aaPredicted RBP4.56□□□□□ -1.68
PMS1-209ENST00000424059 DBNDD2Q9BQY9 259 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 SOX17Q9H6I2 414 aaPredicted RBP4.56□□□□□ -1.68
PMS1-209ENST00000424059 KCNK4Q9NYG8 393 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 CNTN3Q9P232 1028 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 SOX13Q9UN79 622 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 EDN3P14138 238 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 USP5P45974 858 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 NFIAQ12857 509 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 SNX29Q8TEQ0 813 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 CARD10Q9BWT7 1032 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 C7orf69Q9H7B7 122 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 DZANK1Q9NVP4 752 aa4.56□□□□□ -1.68
PMS1-209ENST00000424059 NFKBIEO00221 500 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 SART1O43290 800 aaKnown RBP4.55□□□□□ -1.68
PMS1-209ENST00000424059 FAM13AO94988 1023 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 EIF1AXP47813 144 aaKnown RBP4.55□□□□□ -1.68
PMS1-209ENST00000424059 SF3B2Q13435 895 aaKnown RBP4.55□□□□□ -1.68
PMS1-209ENST00000424059 CPSF6Q16630 551 aaKnown RBP eCLIP4.55□□□□□ -1.68
PMS1-209ENST00000424059 TXNDC11Q6PKC3 985 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 ZDHHC13Q8IUH4 622 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 FAM20CQ8IXL6 584 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 FAM83CQ9BQN1 747 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 SH2B1Q9NRF2 756 aaPredicted RBP4.55□□□□□ -1.68
PMS1-209ENST00000424059 PODXL2Q9NZ53 605 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 KANSL3Q9P2N6 904 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 ADAM11O75078 769 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 DNM1Q05193 864 aaKnown RBP4.55□□□□□ -1.68
PMS1-209ENST00000424059 C19orf57Q0VDD7 668 aa4.55□□□□□ -1.68
PMS1-209ENST00000424059 C1orf127Q8N9H9 656 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms