RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MYO3BQ8WXR4 1341 aa21.68■■□□□ 1.06
CHCHD3-202ENST00000423635 MED23Q9ULK4 1368 aa21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 STRIP1Q5VSL9 837 aa21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 JARID2Q92833 1246 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 R3HDMLQ9H3Y0 253 aa21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 BSDC1Q9NW68 430 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 MINPP1Q9UNW1 487 aa21.67■■□□□ 1.06
CHCHD3-202ENST00000423635 LDLRAD1Q5T700 205 aa21.66■■□□□ 1.06
CHCHD3-202ENST00000423635 ARMC9Q7Z3E5 817 aa21.66■■□□□ 1.06
CHCHD3-202ENST00000423635 CDC5LQ99459 802 aaKnown RBP21.66■■□□□ 1.06
CHCHD3-202ENST00000423635 METTL22Q9BUU2 404 aaPredicted RBP21.66■■□□□ 1.06
CHCHD3-202ENST00000423635 MXD3Q9BW11 206 aa21.66■■□□□ 1.06
CHCHD3-202ENST00000423635 ALDH1A1P00352 501 aa21.65■■□□□ 1.06
CHCHD3-202ENST00000423635 MKRN3Q13064 507 aaKnown RBP21.65■■□□□ 1.06
CHCHD3-202ENST00000423635 COA1Q9GZY4 146 aa21.65■■□□□ 1.06
CHCHD3-202ENST00000423635 SPRYD7Q5W111 196 aa21.64■■□□□ 1.05
CHCHD3-202ENST00000423635 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.05
CHCHD3-202ENST00000423635 CCT4P50991 539 aaKnown RBP21.63■■□□□ 1.05
CHCHD3-202ENST00000423635 INHBEP58166 350 aa21.63■■□□□ 1.05
CHCHD3-202ENST00000423635 CTSWP56202 376 aa21.62■■□□□ 1.05
CHCHD3-202ENST00000423635 APOBEC3FQ8IUX4 373 aaKnown RBP21.62■■□□□ 1.05
CHCHD3-202ENST00000423635 ZBED3Q96IU2 234 aaPredicted RBP21.62■■□□□ 1.05
CHCHD3-202ENST00000423635 ADAMTS8Q9UP79 889 aa21.62■■□□□ 1.05
CHCHD3-202ENST00000423635 DDX58O95786 925 aaKnown RBP21.61■■□□□ 1.05
CHCHD3-202ENST00000423635 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
CHCHD3-202ENST00000423635 LEMD3Q9Y2U8 911 aa21.61■■□□□ 1.05
CHCHD3-202ENST00000423635 MKI67P46013 3256 aaKnown RBP21.61■■□□□ 1.05
CHCHD3-202ENST00000423635 SASH1O94885 1247 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 MAP3K11Q16584 847 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 TTLL5Q6EMB2 1281 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 TXNRD3Q86VQ6 643 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 GREM2Q9H772 168 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 ZNF646O15015 1829 aaPredicted RBP21.6■■□□□ 1.05
CHCHD3-202ENST00000423635 MANSC4A6NHS7 340 aaPredicted RBP21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 ELL2O00472 640 aaPredicted RBP21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 PRKG1Q13976 671 aa21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 FBXW7Q969H0 707 aa21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 CHMP4AQ9BY43 222 aa21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 ANGEL1Q9UNK9 670 aaKnown RBP21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 HTTP42858 3142 aa21.59■■□□□ 1.05
CHCHD3-202ENST00000423635 IGKV5-2P06315 115 aa21.58■■□□□ 1.05
CHCHD3-202ENST00000423635 HABP4Q5JVS0 413 aaKnown RBP21.58■■□□□ 1.05
CHCHD3-202ENST00000423635 IFNL1Q8IU54 200 aa21.58■■□□□ 1.05
CHCHD3-202ENST00000423635 MAP3K2Q9Y2U5 619 aa21.58■■□□□ 1.05
CHCHD3-202ENST00000423635 UNCXA6NJT0 531 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 GNAI1P63096 354 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 KSR2Q6VAB6 950 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 OTOP1Q7RTM1 612 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 SLC10A4Q96EP9 437 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 TRIM17Q9Y577 477 aa21.57■■□□□ 1.04
CHCHD3-202ENST00000423635 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 KIAA0825Q8IV33 1275 aa21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 C8orf58Q8NAV2 365 aa21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 DEFB129Q9H1M3 183 aa21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 COL1A1P02452 1464 aaPredicted RBP21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 ZNF804BA4D1E1 1349 aa21.56■■□□□ 1.04
CHCHD3-202ENST00000423635 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 PI4KAP2A4QPH2 592 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 GTF2IP78347 998 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 CALD1Q05682 793 aaKnown RBP21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 PI4KAP1Q8N8J0 262 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 MTMR14Q8NCE2 650 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 ANKRD2Q9GZV1 360 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 FZD1Q9UP38 647 aa21.55■■□□□ 1.04
CHCHD3-202ENST00000423635 H7C1W4 665 aa21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 IGF2BP3O00425 579 aaKnown RBP eCLIP21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 PPP1R12BO60237 982 aaPredicted RBP21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 WNK4Q96J92 1243 aa21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 PTPN22Q9Y2R2 807 aa21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 PPP2R3BQ9Y5P8 575 aa21.54■■□□□ 1.04
CHCHD3-202ENST00000423635 CENPFP49454 3210 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 KLRK1P26718 216 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 DLGAP5Q15398 846 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 ERO1AQ96HE7 468 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 CD209Q9NNX6 404 aa21.53■■□□□ 1.04
CHCHD3-202ENST00000423635 NEURL1BA8MQ27 555 aa21.52■■□□□ 1.03
CHCHD3-202ENST00000423635 NEXNQ0ZGT2 675 aa21.52■■□□□ 1.03
CHCHD3-202ENST00000423635 MYH3P11055 1940 aa21.51■■□□□ 1.03
CHCHD3-202ENST00000423635 ARMC5Q96C12 935 aa21.51■■□□□ 1.03
CHCHD3-202ENST00000423635 CLMNQ96JQ2 1002 aa21.51■■□□□ 1.03
CHCHD3-202ENST00000423635 CSF1RP07333 972 aa21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 ITGA6P23229 1130 aa21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 CWF19L2Q2TBE0 894 aaKnown RBP21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 SUPT20HL1Q3ZLR7 823 aa21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 OTUD7BQ6GQQ9 843 aa21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
CHCHD3-202ENST00000423635 SSC5DA1L4H1 1573 aa21.49■■□□□ 1.03
CHCHD3-202ENST00000423635 IRS2Q9Y4H2 1338 aa21.49■■□□□ 1.03
CHCHD3-202ENST00000423635 LAMB1P07942 1786 aa21.49■■□□□ 1.03
CHCHD3-202ENST00000423635 TESPA1A2RU30 521 aaPredicted RBP21.49■■□□□ 1.03
CHCHD3-202ENST00000423635 APAF1O14727 1248 aa21.49■■□□□ 1.03
CHCHD3-202ENST00000423635 C15orf52Q6ZUT6 534 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms