RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 RPAP1Q9BWH6 1393 aaPredicted RBP10.76□□□□□ -0.69
SNX20-203ENST00000423026 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNX20-203ENST00000423026 CCNL1Q9UK58 526 aaPredicted RBP10.76□□□□□ -0.69
SNX20-203ENST00000423026 ZPR1O75312 459 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 ZAP70P43403 619 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 KCNQ4P56696 695 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 CDC5LQ99459 802 aaKnown RBP10.76□□□□□ -0.69
SNX20-203ENST00000423026 LAMB2P55268 1798 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 TPM2P07951 284 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 WASHC4Q2M389 1173 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 PTF1AQ7RTS3 328 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 ALDH8A1Q9H2A2 487 aaPredicted RBP10.75□□□□□ -0.69
SNX20-203ENST00000423026 NARFQ9UHQ1 456 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
SNX20-203ENST00000423026 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
SNX20-203ENST00000423026 GNPATO15228 680 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
SNX20-203ENST00000423026 CHGBP05060 677 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 PKP1Q13835 747 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 FAM182BQ5T319 152 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 NYXQ9GZU5 481 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 SEC31BQ9NQW1 1179 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 SMC3Q9UQE7 1217 aa10.75□□□□□ -0.69
SNX20-203ENST00000423026 MYH7P12883 1935 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 WDR33Q9C0J8 1336 aaKnown RBP10.74□□□□□ -0.69
SNX20-203ENST00000423026 BRD1O95696 1058 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
SNX20-203ENST00000423026 FGFR2P21802 821 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 SCARF1Q14162 830 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
SNX20-203ENST00000423026 APPBP2Q92624 585 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 SETDB2Q96T68 719 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
SNX20-203ENST00000423026 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 LRP5O75197 1615 aa10.74□□□□□ -0.69
SNX20-203ENST00000423026 MAST3O60307 1309 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 CYP21A2P08686 494 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 HSPD1P10809 573 aaKnown RBP10.73□□□□□ -0.69
SNX20-203ENST00000423026 MCAMP43121 646 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 BICDL1Q6ZP65 573 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 ZDHHC9Q9Y397 364 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 AKAP11Q9UKA4 1901 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 ATRNO75882 1429 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 ESPNB1AK53 854 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
SNX20-203ENST00000423026 SF3B3Q15393 1217 aaKnown RBP10.73□□□□□ -0.69
SNX20-203ENST00000423026 ANKRD18AQ8IVF6 992 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 CCDC83Q8IWF9 413 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 OSBP2Q969R2 916 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 SBF2Q86WG5 1849 aa10.73□□□□□ -0.69
SNX20-203ENST00000423026 PHKA1P46020 1223 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 TBC1D9BQ66K14 1250 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 SCN7AQ01118 1682 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 M0R2C6 588 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 PDIA4P13667 645 aaKnown RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 FGD1P98174 961 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 ME3Q16798 604 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 SLC10A5Q5PT55 438 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 TPTE2Q6XPS3 522 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 PDCL3Q9H2J4 239 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 QTRT2Q9H974 415 aaKnown RBP10.72□□□□□ -0.69
SNX20-203ENST00000423026 TAF6LQ9Y6J9 622 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 LY75O60449 1722 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
SNX20-203ENST00000423026 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.69
SNX20-203ENST00000423026 LARGE1O95461 756 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 RFC4P35249 363 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 CHRNDQ07001 517 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 TRAPPC3LQ5T215 181 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 SLC9C2Q5TAH2 1124 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 PANK2Q9BZ23 570 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
SNX20-203ENST00000423026 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
SNX20-203ENST00000423026 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
SNX20-203ENST00000423026 TAF1LQ8IZX4 1826 aa10.71□□□□□ -0.7
SNX20-203ENST00000423026 ADD2P35612 726 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 UBE3CQ15386 1083 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
SNX20-203ENST00000423026 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
SNX20-203ENST00000423026 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
SNX20-203ENST00000423026 TCEANC2Q96MN5 208 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 SRP68Q9UHB9 627 aaKnown RBP10.7□□□□□ -0.7
SNX20-203ENST00000423026 NPHP1O15259 732 aa10.7□□□□□ -0.7
SNX20-203ENST00000423026 STX6O43752 255 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms