RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KRT26Q7Z3Y9 468 aa10.87□□□□□ -0.67
MDC1-204ENST00000422266 TRPM4Q8TD43 1214 aa10.87□□□□□ -0.67
MDC1-204ENST00000422266 GPR101Q96P66 508 aaPredicted RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 API5Q9BZZ5 524 aaKnown RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
MDC1-204ENST00000422266 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 PITPNM2Q9BZ72 1349 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
MDC1-204ENST00000422266 VEGFBP49765 207 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 HIRAP54198 1017 aaPredicted RBP10.86□□□□□ -0.67
MDC1-204ENST00000422266 UBE4AQ14139 1066 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
MDC1-204ENST00000422266 DIEXFQ68CQ4 756 aaKnown RBP10.86□□□□□ -0.67
MDC1-204ENST00000422266 SAMD7Q7Z3H4 446 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 BEGAINQ9BUH8 593 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 MYOZ2Q9NPC6 264 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
MDC1-204ENST00000422266 MROH5Q6ZUA9 1318 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 WDR33Q9C0J8 1336 aaKnown RBP10.85□□□□□ -0.67
MDC1-204ENST00000422266 MAP2K2P36507 400 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 FKBP1AP62942 108 aaKnown RBP10.85□□□□□ -0.67
MDC1-204ENST00000422266 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
MDC1-204ENST00000422266 CST9Q5W186 159 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
MDC1-204ENST00000422266 SAPCD2Q86UD0 394 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 C2orf69Q8N8R5 385 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 FBXW7Q969H0 707 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 GMLQ99445 158 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 GLIS2Q9BZE0 524 aaPredicted RBP10.85□□□□□ -0.67
MDC1-204ENST00000422266 COL4A1P02462 1669 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 TRPM7Q96QT4 1865 aa10.85□□□□□ -0.67
MDC1-204ENST00000422266 TRAF5O00463 557 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 CA12O43570 354 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 NBPF7P0C2Y1 421 aaPredicted RBP10.84□□□□□ -0.67
MDC1-204ENST00000422266 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
MDC1-204ENST00000422266 FKBP1BP68106 108 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 SCARF1Q14162 830 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 DACT2Q5SW24 774 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 BICC1Q9H694 974 aaKnown RBP10.84□□□□□ -0.67
MDC1-204ENST00000422266 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 GGA3Q9NZ52 723 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
MDC1-204ENST00000422266 MYO1BO43795 1136 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 UBTFL1P0CB47 393 aaPredicted RBP10.83□□□□□ -0.68
MDC1-204ENST00000422266 IL1R1P14778 569 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 NF2P35240 595 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 GTF2IP78347 998 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 CAVIN4Q5BKX8 364 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 EPHA10Q5JZY3 1008 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 CAPNS2Q96L46 248 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 ZNF408Q9H9D4 720 aa10.83□□□□□ -0.68
MDC1-204ENST00000422266 PSME4Q14997 1843 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 PLIN1O60240 522 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 TAF5LO75529 589 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 SASH1O94885 1247 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 RARSP54136 660 aaKnown RBP10.82□□□□□ -0.68
MDC1-204ENST00000422266 NOGQ13253 232 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 APOBEC3FQ8IUX4 373 aaKnown RBP10.82□□□□□ -0.68
MDC1-204ENST00000422266 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 GBA2Q9HCG7 927 aaPredicted RBP10.82□□□□□ -0.68
MDC1-204ENST00000422266 PRDM10Q9NQV6 1147 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 WBP1LQ9NX94 342 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 NOB1Q9ULX3 412 aaKnown RBP10.82□□□□□ -0.68
MDC1-204ENST00000422266 SCN9AQ15858 1988 aa10.82□□□□□ -0.68
MDC1-204ENST00000422266 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
MDC1-204ENST00000422266 GNAI3P08754 354 aa10.81□□□□□ -0.68
MDC1-204ENST00000422266 IFIT1P09914 478 aaKnown RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 HIBADHP31937 336 aaKnown RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 HUNKP57058 714 aa10.81□□□□□ -0.68
MDC1-204ENST00000422266 METTL24Q5JXM2 366 aa10.81□□□□□ -0.68
MDC1-204ENST00000422266 ANGEL2Q5VTE6 544 aaKnown RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 HELBQ8NG08 1087 aaPredicted RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
MDC1-204ENST00000422266 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
MDC1-204ENST00000422266 PCNTO95613 3336 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 WNT10BO00744 389 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
MDC1-204ENST00000422266 PDE8BO95263 885 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 EGFRP00533 1210 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 DLGAP5Q15398 846 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 CYP4F22Q6NT55 531 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 KIAA0825Q8IV33 1275 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 KAZALD1Q96I82 304 aa10.8□□□□□ -0.68
MDC1-204ENST00000422266 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
MDC1-204ENST00000422266 KLRK1P26718 216 aa10.79□□□□□ -0.68
MDC1-204ENST00000422266 HNRNPUQ00839 825 aaKnown RBP eCLIP10.79□□□□□ -0.68
MDC1-204ENST00000422266 FMR1Q06787 632 aaKnown RBP eCLIP10.79□□□□□ -0.68
MDC1-204ENST00000422266 GRM1Q13255 1194 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms