RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 CNNM1Q9NRU3 951 aa22.73■■□□□ 1.23
UBXN11-208ENST00000421827 ZNF609O15014 1411 aa22.73■■□□□ 1.23
UBXN11-208ENST00000421827 TRAF5O00463 557 aa22.72■■□□□ 1.23
UBXN11-208ENST00000421827 FMR1Q06787 632 aaKnown RBP eCLIP22.72■■□□□ 1.23
UBXN11-208ENST00000421827 ANKRD44Q8N8A2 993 aa22.72■■□□□ 1.23
UBXN11-208ENST00000421827 MKRN1Q9UHC7 482 aaKnown RBP22.72■■□□□ 1.23
UBXN11-208ENST00000421827 PSME4Q14997 1843 aa22.71■■□□□ 1.23
UBXN11-208ENST00000421827 SNAP23O00161 211 aa22.71■■□□□ 1.23
UBXN11-208ENST00000421827 EGFRP00533 1210 aa22.71■■□□□ 1.23
UBXN11-208ENST00000421827 RBM26Q5T8P6 1007 aaKnown RBP22.71■■□□□ 1.23
UBXN11-208ENST00000421827 GMLQ99445 158 aa22.71■■□□□ 1.23
UBXN11-208ENST00000421827 KIF4BQ2VIQ3 1234 aa22.7■■□□□ 1.22
UBXN11-208ENST00000421827 C15orf52Q6ZUT6 534 aaKnown RBP22.7■■□□□ 1.22
UBXN11-208ENST00000421827 GLIS2Q9BZE0 524 aaPredicted RBP22.7■■□□□ 1.22
UBXN11-208ENST00000421827 KIF16BQ96L93 1317 aa22.7■■□□□ 1.22
UBXN11-208ENST00000421827 CNTNAP1P78357 1384 aa22.7■■□□□ 1.22
UBXN11-208ENST00000421827 IRS2Q9Y4H2 1338 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 PLIN1O60240 522 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 ZNF280AP59817 542 aaPredicted RBP22.69■■□□□ 1.22
UBXN11-208ENST00000421827 DACT2Q5SW24 774 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 CDC37L1Q7L3B6 337 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 PCNTO95613 3336 aa22.69■■□□□ 1.22
UBXN11-208ENST00000421827 USP17L8P0C7I0 530 aa22.68■■□□□ 1.22
UBXN11-208ENST00000421827 ARHGAP45Q92619 1136 aa22.68■■□□□ 1.22
UBXN11-208ENST00000421827 PUS3Q9BZE2 481 aaKnown RBP22.68■■□□□ 1.22
UBXN11-208ENST00000421827 CST9Q5W186 159 aa22.67■■□□□ 1.22
UBXN11-208ENST00000421827 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
UBXN11-208ENST00000421827 ABT1Q9ULW3 272 aaKnown RBP22.67■■□□□ 1.22
UBXN11-208ENST00000421827 A0A1B0GUL6 1792 aa22.67■■□□□ 1.22
UBXN11-208ENST00000421827 MYO3BQ8WXR4 1341 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 RASSF10A6NK89 507 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 ZNF804AQ7Z570 1209 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 MXD3Q9BW11 206 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 RIPOR2Q9Y4F9 1068 aa22.66■■□□□ 1.22
UBXN11-208ENST00000421827 MROH5Q6ZUA9 1318 aa22.65■■□□□ 1.22
UBXN11-208ENST00000421827 CELF2O95319 508 aaKnown RBP22.65■■□□□ 1.22
UBXN11-208ENST00000421827 UBTFL1P0CB47 393 aaPredicted RBP22.65■■□□□ 1.22
UBXN11-208ENST00000421827 UBE4AQ14139 1066 aa22.65■■□□□ 1.22
UBXN11-208ENST00000421827 DEFB115Q30KQ5 88 aa22.65■■□□□ 1.22
UBXN11-208ENST00000421827 USP48Q86UV5 1035 aa22.65■■□□□ 1.22
UBXN11-208ENST00000421827 DCPSQ96C86 337 aaKnown RBP22.65■■□□□ 1.22
UBXN11-208ENST00000421827 MYOZ2Q9NPC6 264 aa22.65■■□□□ 1.22
UBXN11-208ENST00000421827 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.22
UBXN11-208ENST00000421827 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
UBXN11-208ENST00000421827 VEGFBP49765 207 aa22.64■■□□□ 1.21
UBXN11-208ENST00000421827 GTF2IP78347 998 aa22.64■■□□□ 1.21
UBXN11-208ENST00000421827 KRT26Q7Z3Y9 468 aa22.64■■□□□ 1.21
UBXN11-208ENST00000421827 BCAR3O75815 825 aa22.63■■□□□ 1.21
UBXN11-208ENST00000421827 SCARF1Q14162 830 aa22.63■■□□□ 1.21
UBXN11-208ENST00000421827 LRRC24Q50LG9 513 aa22.63■■□□□ 1.21
UBXN11-208ENST00000421827 OGFOD1Q8N543 542 aa22.63■■□□□ 1.21
UBXN11-208ENST00000421827 ZNF646O15015 1829 aaPredicted RBP22.62■■□□□ 1.21
UBXN11-208ENST00000421827 IL1R1P14778 569 aa22.62■■□□□ 1.21
UBXN11-208ENST00000421827 INTS3Q68E01 1043 aaKnown RBP22.62■■□□□ 1.21
UBXN11-208ENST00000421827 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
UBXN11-208ENST00000421827 ZNF408Q9H9D4 720 aa22.62■■□□□ 1.21
UBXN11-208ENST00000421827 GGA3Q9NZ52 723 aa22.62■■□□□ 1.21
UBXN11-208ENST00000421827 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
UBXN11-208ENST00000421827 ASTN2O75129 1339 aaPredicted RBP22.61■■□□□ 1.21
UBXN11-208ENST00000421827 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
UBXN11-208ENST00000421827 MMP14P50281 582 aa22.61■■□□□ 1.21
UBXN11-208ENST00000421827 METTL24Q5JXM2 366 aa22.61■■□□□ 1.21
UBXN11-208ENST00000421827 FRAT1Q92837 279 aaPredicted RBP22.61■■□□□ 1.21
UBXN11-208ENST00000421827 TLL2Q9Y6L7 1015 aa22.61■■□□□ 1.21
UBXN11-208ENST00000421827 ADM5C9JUS6 153 aa22.6■■□□□ 1.21
UBXN11-208ENST00000421827 TRIM27P14373 513 aa22.6■■□□□ 1.21
UBXN11-208ENST00000421827 RFX5P48382 616 aaPredicted RBP22.6■■□□□ 1.21
UBXN11-208ENST00000421827 DLK2Q6UY11 383 aa22.6■■□□□ 1.21
UBXN11-208ENST00000421827 SULF1Q8IWU6 871 aa22.6■■□□□ 1.21
UBXN11-208ENST00000421827 ANGEL2Q5VTE6 544 aaKnown RBP22.59■■□□□ 1.21
UBXN11-208ENST00000421827 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
UBXN11-208ENST00000421827 KIAA0825Q8IV33 1275 aa22.59■■□□□ 1.21
UBXN11-208ENST00000421827 MEIS3Q99687 375 aa22.59■■□□□ 1.21
UBXN11-208ENST00000421827 LRRFIP2Q9Y608 721 aaKnown RBP22.59■■□□□ 1.21
UBXN11-208ENST00000421827 POLR2AP24928 1970 aaKnown RBP22.59■■□□□ 1.21
UBXN11-208ENST00000421827 PDE8BO95263 885 aa22.58■■□□□ 1.21
UBXN11-208ENST00000421827 HSPA1AP0DMV8 641 aaKnown RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 HSPA1BP0DMV9 641 aaKnown RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 GYG1P46976 350 aa22.58■■□□□ 1.21
UBXN11-208ENST00000421827 PTPN12Q05209 780 aaKnown RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 SAPCD2Q86UD0 394 aa22.58■■□□□ 1.21
UBXN11-208ENST00000421827 VGLL2Q8N8G2 317 aa22.58■■□□□ 1.21
UBXN11-208ENST00000421827 FAM84BQ96KN1 310 aaPredicted RBP22.58■■□□□ 1.21
UBXN11-208ENST00000421827 HDAC9Q9UKV0 1011 aa22.58■■□□□ 1.21
UBXN11-208ENST00000421827 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
UBXN11-208ENST00000421827 GNAI3P08754 354 aa22.57■■□□□ 1.2
UBXN11-208ENST00000421827 NBPF9Q3BBW0 867 aa22.57■■□□□ 1.2
UBXN11-208ENST00000421827 CERS5Q8N5B7 392 aa22.57■■□□□ 1.2
UBXN11-208ENST00000421827 TNNQ9UQP3 1299 aa22.57■■□□□ 1.2
UBXN11-208ENST00000421827 PITPNM2Q9BZ72 1349 aa22.57■■□□□ 1.2
UBXN11-208ENST00000421827 EYA2O00167 538 aa22.56■■□□□ 1.2
UBXN11-208ENST00000421827 SASH1O94885 1247 aa22.56■■□□□ 1.2
UBXN11-208ENST00000421827 ECE1P42892 770 aa22.56■■□□□ 1.2
UBXN11-208ENST00000421827 FKBP1AP62942 108 aaKnown RBP22.56■■□□□ 1.2
UBXN11-208ENST00000421827 TDRD7Q8NHU6 1098 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms