RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TNNI3KQ59H18 835 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 CLASRPQ8N2M8 674 aaKnown RBP21.61■■□□□ 1.05
LINC00271-201ENST00000421378 ZC3H12CQ9C0D7 883 aaKnown RBP21.61■■□□□ 1.05
LINC00271-201ENST00000421378 PPP4R2Q9NY27 417 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 FPGT-TNNI3KV9GXZ4 949 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 ARAP2Q8WZ64 1704 aa21.6■■□□□ 1.05
LINC00271-201ENST00000421378 IARSP41252 1262 aaKnown RBP21.6■■□□□ 1.05
LINC00271-201ENST00000421378 KIAA2012Q0VF49 1180 aa21.6■■□□□ 1.05
LINC00271-201ENST00000421378 AOC3Q16853 763 aa21.6■■□□□ 1.05
LINC00271-201ENST00000421378 VPS33BQ9H267 617 aa21.6■■□□□ 1.05
LINC00271-201ENST00000421378 RIMBP2O15034 1052 aa21.59■■□□□ 1.05
LINC00271-201ENST00000421378 LMNB1P20700 586 aa21.59■■□□□ 1.05
LINC00271-201ENST00000421378 TIMM10P62072 90 aa21.59■■□□□ 1.05
LINC00271-201ENST00000421378 C15orf52Q6ZUT6 534 aaKnown RBP21.59■■□□□ 1.05
LINC00271-201ENST00000421378 BCL11AQ9H165 835 aa21.59■■□□□ 1.05
LINC00271-201ENST00000421378 ZBTB47Q9UFB7 747 aaPredicted RBP21.59■■□□□ 1.05
LINC00271-201ENST00000421378 IRS2Q9Y4H2 1338 aa21.59■■□□□ 1.05
LINC00271-201ENST00000421378 TXNRD3Q86VQ6 643 aa21.58■■□□□ 1.05
LINC00271-201ENST00000421378 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
LINC00271-201ENST00000421378 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
LINC00271-201ENST00000421378 SMARCA5O60264 1052 aaPredicted RBP21.57■■□□□ 1.04
LINC00271-201ENST00000421378 ANKRD45Q5TZF3 282 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 B4GALNT3Q6L9W6 998 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 AACSQ86V21 672 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 EAF2Q96CJ1 260 aaPredicted RBP21.57■■□□□ 1.04
LINC00271-201ENST00000421378 SBF1O95248 1867 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 PRELPP51888 382 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 CAVIN4Q5BKX8 364 aa21.57■■□□□ 1.04
LINC00271-201ENST00000421378 CCDC88AQ3V6T2 1871 aa21.56■■□□□ 1.04
LINC00271-201ENST00000421378 GYG1P46976 350 aa21.56■■□□□ 1.04
LINC00271-201ENST00000421378 CENPQQ7L2Z9 268 aaPredicted RBP21.56■■□□□ 1.04
LINC00271-201ENST00000421378 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
LINC00271-201ENST00000421378 VPS37DQ86XT2 251 aa21.56■■□□□ 1.04
LINC00271-201ENST00000421378 XAGE2Q96GT9 111 aa21.56■■□□□ 1.04
LINC00271-201ENST00000421378 G3V3G9 751 aa21.55■■□□□ 1.04
LINC00271-201ENST00000421378 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
LINC00271-201ENST00000421378 ADORA1P30542 326 aa21.55■■□□□ 1.04
LINC00271-201ENST00000421378 DCAF8Q5TAQ9 597 aa21.55■■□□□ 1.04
LINC00271-201ENST00000421378 JDP2Q8WYK2 163 aa21.55■■□□□ 1.04
LINC00271-201ENST00000421378 CCDC8Q9H0W5 538 aaPredicted RBP21.55■■□□□ 1.04
LINC00271-201ENST00000421378 DBNLQ9UJU6 430 aaKnown RBP21.55■■□□□ 1.04
LINC00271-201ENST00000421378 COL4A5P29400 1685 aa21.55■■□□□ 1.04
LINC00271-201ENST00000421378 NIM1KQ8IY84 436 aa21.54■■□□□ 1.04
LINC00271-201ENST00000421378 FAM84BQ96KN1 310 aaPredicted RBP21.54■■□□□ 1.04
LINC00271-201ENST00000421378 DBNDD1Q9H9R9 158 aa21.54■■□□□ 1.04
LINC00271-201ENST00000421378 TLR7Q9NYK1 1049 aaKnown RBP21.54■■□□□ 1.04
LINC00271-201ENST00000421378 HIBADHP31937 336 aaKnown RBP21.53■■□□□ 1.04
LINC00271-201ENST00000421378 NUCB1Q02818 461 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 DOK7Q18PE1 504 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 GORABQ5T7V8 394 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 DBNDD2Q9BQY9 259 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 COA1Q9GZY4 146 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 RNF181Q9P0P0 153 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 DICER1Q9UPY3 1922 aaKnown RBP21.53■■□□□ 1.04
LINC00271-201ENST00000421378 ECE2O60344 883 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 BCAMP50895 628 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 C9orf131Q5VYM1 1079 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 FBXO33Q7Z6M2 555 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
LINC00271-201ENST00000421378 TIAM2Q8IVF5 1701 aa21.52■■□□□ 1.04
LINC00271-201ENST00000421378 CCDC102BQ68D86 513 aa21.52■■□□□ 1.04
LINC00271-201ENST00000421378 LNPKQ9C0E8 428 aa21.52■■□□□ 1.04
LINC00271-201ENST00000421378 CD209Q9NNX6 404 aa21.52■■□□□ 1.04
LINC00271-201ENST00000421378 PHKA1P46020 1223 aa21.51■■□□□ 1.03
LINC00271-201ENST00000421378 PODNQ7Z5L7 613 aa21.51■■□□□ 1.03
LINC00271-201ENST00000421378 CCDC158Q5M9N0 1113 aa21.5■■□□□ 1.03
LINC00271-201ENST00000421378 GNL3LQ9NVN8 582 aaKnown RBP21.5■■□□□ 1.03
LINC00271-201ENST00000421378 ZNRF3Q9ULT6 936 aa21.5■■□□□ 1.03
LINC00271-201ENST00000421378 IL1R1P14778 569 aa21.49■■□□□ 1.03
LINC00271-201ENST00000421378 FRAT2O75474 233 aaPredicted RBP21.48■■□□□ 1.03
LINC00271-201ENST00000421378 IQSEC3Q9UPP2 1182 aaPredicted RBP21.48■■□□□ 1.03
LINC00271-201ENST00000421378 CHD4Q14839 1912 aa21.48■■□□□ 1.03
LINC00271-201ENST00000421378 YDJCA8MPS7 323 aa21.48■■□□□ 1.03
LINC00271-201ENST00000421378 TTC39AQ5SRH9 613 aa21.48■■□□□ 1.03
LINC00271-201ENST00000421378 C16orf71Q8IYS4 520 aaPredicted RBP21.48■■□□□ 1.03
LINC00271-201ENST00000421378 TDRD7Q8NHU6 1098 aaKnown RBP21.48■■□□□ 1.03
LINC00271-201ENST00000421378 FZD9O00144 591 aa21.47■■□□□ 1.03
LINC00271-201ENST00000421378 ARID4AP29374 1257 aaPredicted RBP21.47■■□□□ 1.03
LINC00271-201ENST00000421378 SCN9AQ15858 1988 aa21.47■■□□□ 1.03
LINC00271-201ENST00000421378 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
LINC00271-201ENST00000421378 MYH13Q9UKX3 1938 aa21.47■■□□□ 1.03
LINC00271-201ENST00000421378 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
LINC00271-201ENST00000421378 ZC3H4Q9UPT8 1303 aaKnown RBP21.46■■□□□ 1.03
LINC00271-201ENST00000421378 UQCRFS1P1P0C7P4 283 aa21.46■■□□□ 1.03
LINC00271-201ENST00000421378 OTUD7AQ8TE49 926 aaPredicted RBP21.46■■□□□ 1.03
LINC00271-201ENST00000421378 SEMA3EO15041 775 aa21.45■■□□□ 1.02
LINC00271-201ENST00000421378 MX1P20591 662 aa21.45■■□□□ 1.02
LINC00271-201ENST00000421378 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
LINC00271-201ENST00000421378 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
LINC00271-201ENST00000421378 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
LINC00271-201ENST00000421378 RAD17O75943 681 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 KCNQ5Q9NR82 932 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 ECHDC1Q9NTX5 307 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 DENND2AQ9ULE3 1009 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 COL1A1P02452 1464 aaPredicted RBP21.44■■□□□ 1.02
LINC00271-201ENST00000421378 PSME4Q14997 1843 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 SALL3Q9BXA9 1300 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 ZBTB22O15209 634 aa21.44■■□□□ 1.02
LINC00271-201ENST00000421378 MCAMP43121 646 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms