RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
PTCH1-206ENST00000421141 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-206ENST00000421141 TSPY26PQ9H489 355 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 CTSWP56202 376 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 POLR1AO95602 1720 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-206ENST00000421141 ZBTB43O43298 467 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 RTN1Q16799 776 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 CALM1P0DP23 149 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 CALM2P0DP24 149 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 CALM3P0DP25 149 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 JCADQ9P266 1359 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 MIGA1Q8NAN2 632 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
PTCH1-206ENST00000421141 CCP110O43303 1012 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
PTCH1-206ENST00000421141 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
PTCH1-206ENST00000421141 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
PTCH1-206ENST00000421141 GSE1Q14687 1217 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 UBA5Q9GZZ9 404 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 RNF113AO15541 343 aaKnown RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 CBFA2T2O43439 604 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 PTPRMP28827 1452 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
PTCH1-206ENST00000421141 SEPT11Q9NVA2 429 aaKnown RBP12.4□□□□□ -0.42
PTCH1-206ENST00000421141 EYA2O00167 538 aa12.4□□□□□ -0.43
PTCH1-206ENST00000421141 CHL1O00533 1208 aa12.4□□□□□ -0.43
PTCH1-206ENST00000421141 LPIN2Q92539 896 aa12.4□□□□□ -0.43
PTCH1-206ENST00000421141 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 BACH2Q9BYV9 841 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 DLGAP5Q15398 846 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 MADDQ8WXG6 1647 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 PPLO60437 1756 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 PDE1AP54750 535 aa12.39□□□□□ -0.43
PTCH1-206ENST00000421141 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-206ENST00000421141 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 GCKRQ14397 625 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CSADQ9Y600 493 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CEP85Q6P2H3 762 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 SCAND2PQ9GZW5 306 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 NAPAP54920 295 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CETN1Q12798 172 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 TTLL5Q6EMB2 1281 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
PTCH1-206ENST00000421141 IVNS1ABPQ9Y6Y0 642 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
PTCH1-206ENST00000421141 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-206ENST00000421141 ERBB3P21860 1342 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 NEBLO76041 1014 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 RICTORQ6R327 1708 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-206ENST00000421141 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 CALML3P27482 149 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 TRAK2O60296 914 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-206ENST00000421141 SULF1Q8IWU6 871 aa12.37□□□□□ -0.43
PTCH1-206ENST00000421141 UBA7P41226 1012 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 CA8P35219 290 aa12.36□□□□□ -0.43
PTCH1-206ENST00000421141 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
PTCH1-206ENST00000421141 LIG1P18858 919 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms