RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 SETDB1Q15047 1291 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 RUFY3Q7L099 469 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 KRT23Q9C075 422 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 TMOD2Q9NZR1 351 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 CDK13Q14004 1512 aaKnown RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 HPDP32754 393 aaPredicted RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 GSTA5Q7RTV2 222 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 THEMISQ8N1K5 641 aaPredicted RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 COMMD10Q9Y6G5 202 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 ANXA1P04083 346 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CNGA4Q8IV77 575 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 PLEKHM2Q8IWE5 1019 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 EHMT1Q9H9B1 1298 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 LUC7L2Q9Y383 392 aaKnown RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 MYL5Q02045 173 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CREB3L3Q68CJ9 461 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 STIM2Q9P246 746 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CHMP4BP1P59074 171 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 SREK1Q8WXA9 508 aaKnown RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 NAP1L3Q99457 506 aaPredicted RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 RABEP2Q9H5N1 569 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 ZNF652Q9Y2D9 606 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 A0A1B0GVL5 298 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 ZNF445P59923 1031 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 TNNC1P63316 161 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CWC25Q9NXE8 425 aaPredicted RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 PTPDC1A2A3K4 754 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 GPTP24298 496 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CCDC25Q86WR0 208 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 CCDC174Q6PII3 467 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
CLCN4-203ENST00000421085 SEC62Q99442 399 aaKnown RBP13.98□□□□□ -0.17
CLCN4-203ENST00000421085 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
CLCN4-203ENST00000421085 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 CFAP57Q96MR6 1250 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 DCTPP1Q9H773 170 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
CLCN4-203ENST00000421085 CCDC63Q8NA47 563 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 NAPGQ99747 312 aaPredicted RBP13.97□□□□□ -0.17
CLCN4-203ENST00000421085 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 GOLGA6CA6NDK9 693 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
CLCN4-203ENST00000421085 GOLGA6DP0CG33 693 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 ZNF75DP51815 510 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 C8orf58Q8NAV2 365 aa13.97□□□□□ -0.17
CLCN4-203ENST00000421085 CLGNO14967 610 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
CLCN4-203ENST00000421085 ATP11AP98196 1134 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 PPFIBP2Q8ND30 876 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 ATP2A1O14983 1001 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 ZFYP08048 801 aaPredicted RBP13.96□□□□□ -0.17
CLCN4-203ENST00000421085 GJC1P36383 396 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 MTRF1LQ9UGC7 380 aaKnown RBP13.96□□□□□ -0.17
CLCN4-203ENST00000421085 ABCC5O15440 1437 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.17
CLCN4-203ENST00000421085 CHMLP26374 656 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.18
CLCN4-203ENST00000421085 FERMT1Q9BQL6 677 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 SAMM50Q9Y512 469 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 MRVI1Q9Y6F6 885 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.18
CLCN4-203ENST00000421085 BICDL2A1A5D9 508 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 BUB1BO60566 1050 aaPredicted RBP13.96□□□□□ -0.18
CLCN4-203ENST00000421085 CEP85Q6P2H3 762 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 PSMD1Q99460 953 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 CBX8Q9HC52 389 aa13.96□□□□□ -0.18
CLCN4-203ENST00000421085 CCT6AP40227 531 aaKnown RBP13.95□□□□□ -0.18
CLCN4-203ENST00000421085 HEATR3Q7Z4Q2 680 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
CLCN4-203ENST00000421085 INTS8Q75QN2 995 aaKnown RBP13.95□□□□□ -0.18
CLCN4-203ENST00000421085 PCK1P35558 622 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 SARNPP82979 210 aaKnown RBP13.95□□□□□ -0.18
CLCN4-203ENST00000421085 SEPT6Q14141 434 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
CLCN4-203ENST00000421085 TTC21BQ7Z4L5 1316 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 CPA1P15085 419 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 ERMNQ8TAM6 284 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 DDX23Q9BUQ8 820 aaKnown RBP13.94□□□□□ -0.18
CLCN4-203ENST00000421085 CCDC50Q8IVM0 306 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 TSC1Q92574 1164 aa13.94□□□□□ -0.18
CLCN4-203ENST00000421085 ESR2Q92731 530 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms