RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
HDLBP-207ENST00000420451 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 G3V3G9 751 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 SLC10A3P09131 477 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
HDLBP-207ENST00000420451 CASP7P55210 303 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 SCARF1Q14162 830 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
HDLBP-207ENST00000420451 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 MCOLN1Q9GZU1 580 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 MYOZ2Q9NPC6 264 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 SAGE1Q9NXZ1 904 aa13.68□□□□□ -0.22
HDLBP-207ENST00000420451 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
HDLBP-207ENST00000420451 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
HDLBP-207ENST00000420451 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-207ENST00000420451 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
HDLBP-207ENST00000420451 ECM29Q5VYK3 1845 aa13.67□□□□□ -0.22
HDLBP-207ENST00000420451 CSF1RP07333 972 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 ZNF157P51786 506 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-207ENST00000420451 FKBP1BP68106 108 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 GCKRQ14397 625 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 TXNRD3Q86VQ6 643 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 LAMB1P07942 1786 aa13.66□□□□□ -0.22
HDLBP-207ENST00000420451 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-207ENST00000420451 FLIIQ13045 1269 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 RASAL3Q86YV0 1011 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 CSRNP1Q96S65 589 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 COA1Q9GZY4 146 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
HDLBP-207ENST00000420451 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 ITGA6P23229 1130 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 NBPF9Q3BBW0 867 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
HDLBP-207ENST00000420451 WNT10BO00744 389 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 VAMP4O75379 141 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 KLRK1P26718 216 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
HDLBP-207ENST00000420451 MMP14P50281 582 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 DGKZQ13574 1117 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
HDLBP-207ENST00000420451 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-207ENST00000420451 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-207ENST00000420451 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
HDLBP-207ENST00000420451 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
HDLBP-207ENST00000420451 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-207ENST00000420451 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
HDLBP-207ENST00000420451 TRPA1O75762 1119 aa13.61□□□□□ -0.23
HDLBP-207ENST00000420451 FOXO4P98177 505 aa13.61□□□□□ -0.23
HDLBP-207ENST00000420451 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-207ENST00000420451 C15orf52Q6ZUT6 534 aaKnown RBP13.61□□□□□ -0.23
HDLBP-207ENST00000420451 MOB2Q70IA6 237 aa13.61□□□□□ -0.23
HDLBP-207ENST00000420451 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
HDLBP-207ENST00000420451 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
HDLBP-207ENST00000420451 MLLT1Q03111 559 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-207ENST00000420451 CHRNDQ07001 517 aa13.6□□□□□ -0.23
HDLBP-207ENST00000420451 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
HDLBP-207ENST00000420451 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
HDLBP-207ENST00000420451 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
HDLBP-207ENST00000420451 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
HDLBP-207ENST00000420451 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-207ENST00000420451 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
HDLBP-207ENST00000420451 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
HDLBP-207ENST00000420451 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
HDLBP-207ENST00000420451 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
HDLBP-207ENST00000420451 CD209Q9NNX6 404 aa13.59□□□□□ -0.23
HDLBP-207ENST00000420451 ANKRD18BA2A2Z9 1011 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 SNAP23O00161 211 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 SASH1O94885 1247 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 GTF2IP78347 998 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■□□□□ 8.9
HDLBP-207ENST00000420451 KIAA0825Q8IV33 1275 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 CERS5Q8N5B7 392 aa13.58□□□□□ -0.24
HDLBP-207ENST00000420451 IL1R1P14778 569 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 TM4SF4P48230 202 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 SSC5DA1L4H1 1573 aa13.57□□□□□ -0.24
HDLBP-207ENST00000420451 F6X3S4 739 aa13.56□□□□□ -0.24
HDLBP-207ENST00000420451 TAF5LO75529 589 aa13.56□□□□□ -0.24
HDLBP-207ENST00000420451 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
HDLBP-207ENST00000420451 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
HDLBP-207ENST00000420451 LDLRAD1Q5T700 205 aa13.56□□□□□ -0.24
HDLBP-207ENST00000420451 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
HDLBP-207ENST00000420451 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms