RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 CA12O43570 354 aa22.08■■□□□ 1.13
PTCD1-202ENST00000419981 CCT4P50991 539 aaKnown RBP22.08■■□□□ 1.13
PTCD1-202ENST00000419981 NOGQ13253 232 aa22.08■■□□□ 1.13
PTCD1-202ENST00000419981 TSKSQ9UJT2 592 aa22.08■■□□□ 1.13
PTCD1-202ENST00000419981 ZNF316A6NFI3 1004 aaPredicted RBP22.07■■□□□ 1.12
PTCD1-202ENST00000419981 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
PTCD1-202ENST00000419981 GMLQ99445 158 aa22.07■■□□□ 1.12
PTCD1-202ENST00000419981 ASTN2O75129 1339 aaPredicted RBP22.06■■□□□ 1.12
PTCD1-202ENST00000419981 WTIPA6NIX2 430 aaPredicted RBP22.06■■□□□ 1.12
PTCD1-202ENST00000419981 VAMP4O75379 141 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 USP17L8P0C7I0 530 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 ITGA6P23229 1130 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 SCARF1Q14162 830 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 RGMBQ6NW40 437 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 MYOZ2Q9NPC6 264 aa22.06■■□□□ 1.12
PTCD1-202ENST00000419981 CASP7P55210 303 aa22.05■■□□□ 1.12
PTCD1-202ENST00000419981 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
PTCD1-202ENST00000419981 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
PTCD1-202ENST00000419981 ANGEL2Q5VTE6 544 aaKnown RBP22.05■■□□□ 1.12
PTCD1-202ENST00000419981 MPHOSPH8Q99549 860 aa22.05■■□□□ 1.12
PTCD1-202ENST00000419981 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
PTCD1-202ENST00000419981 CDCA5Q96FF9 252 aa22.04■■□□□ 1.12
PTCD1-202ENST00000419981 ABHD8Q96I13 439 aa22.04■■□□□ 1.12
PTCD1-202ENST00000419981 PITPNM2Q9BZ72 1349 aa22.04■■□□□ 1.12
PTCD1-202ENST00000419981 CSF1RP07333 972 aa22.03■■□□□ 1.12
PTCD1-202ENST00000419981 FBXW7Q969H0 707 aa22.03■■□□□ 1.12
PTCD1-202ENST00000419981 ANKRD2Q9GZV1 360 aa22.03■■□□□ 1.12
PTCD1-202ENST00000419981 COA1Q9GZY4 146 aa22.03■■□□□ 1.12
PTCD1-202ENST00000419981 MYO3BQ8WXR4 1341 aa22.03■■□□□ 1.12
PTCD1-202ENST00000419981 CCDC102AQ96A19 550 aa22.02■■□□□ 1.12
PTCD1-202ENST00000419981 ZIC5Q96T25 663 aa22.02■■□□□ 1.12
PTCD1-202ENST00000419981 ZNF804BA4D1E1 1349 aa22.02■■□□□ 1.12
PTCD1-202ENST00000419981 FAM155AB1AL88 458 aaPredicted RBP22.01■■□□□ 1.11
PTCD1-202ENST00000419981 ZNF157P51786 506 aaPredicted RBP22.01■■□□□ 1.11
PTCD1-202ENST00000419981 DACT2Q5SW24 774 aa22.01■■□□□ 1.11
PTCD1-202ENST00000419981 TXNRD3Q86VQ6 643 aa22.01■■□□□ 1.11
PTCD1-202ENST00000419981 ARAP2Q8WZ64 1704 aa22■■□□□ 1.11
PTCD1-202ENST00000419981 ANKRD18BA2A2Z9 1011 aa22■■□□□ 1.11
PTCD1-202ENST00000419981 STRIP1Q5VSL9 837 aa22■■□□□ 1.11
PTCD1-202ENST00000419981 OGFOD1Q8N543 542 aa22■■□□□ 1.11
PTCD1-202ENST00000419981 MXD3Q9BW11 206 aa22■■□□□ 1.11
PTCD1-202ENST00000419981 F6X3S4 739 aa21.99■■□□□ 1.11
PTCD1-202ENST00000419981 KCNJ4P48050 445 aa21.99■■□□□ 1.11
PTCD1-202ENST00000419981 CHRNDQ07001 517 aa21.99■■□□□ 1.11
PTCD1-202ENST00000419981 SPINK5Q9NQ38 1064 aaPredicted RBP21.99■■□□□ 1.11
PTCD1-202ENST00000419981 SLC10A3P09131 477 aa21.98■■□□□ 1.11
PTCD1-202ENST00000419981 KLRK1P26718 216 aa21.98■■□□□ 1.11
PTCD1-202ENST00000419981 BEND3Q5T5X7 828 aa21.98■■□□□ 1.11
PTCD1-202ENST00000419981 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
PTCD1-202ENST00000419981 FKBP1BP68106 108 aa21.97■■□□□ 1.11
PTCD1-202ENST00000419981 IFIT5Q13325 482 aaKnown RBP21.97■■□□□ 1.11
PTCD1-202ENST00000419981 NBPF9Q3BBW0 867 aa21.97■■□□□ 1.11
PTCD1-202ENST00000419981 TTLL5Q6EMB2 1281 aa21.97■■□□□ 1.11
PTCD1-202ENST00000419981 CHMP3Q9Y3E7 222 aa21.97■■□□□ 1.11
PTCD1-202ENST00000419981 MMP14P50281 582 aa21.96■■□□□ 1.11
PTCD1-202ENST00000419981 FOXO4P98177 505 aa21.96■■□□□ 1.11
PTCD1-202ENST00000419981 KIF23Q02241 960 aaPredicted RBP21.96■■□□□ 1.11
PTCD1-202ENST00000419981 SCAF8Q9UPN6 1271 aaKnown RBP21.96■■□□□ 1.11
PTCD1-202ENST00000419981 MYH13Q9UKX3 1938 aa21.96■■□□□ 1.11
PTCD1-202ENST00000419981 WNT10BO00744 389 aa21.95■■□□□ 1.1
PTCD1-202ENST00000419981 SAGE1Q9NXZ1 904 aa21.95■■□□□ 1.1
PTCD1-202ENST00000419981 HDAC9Q9UKV0 1011 aa21.95■■□□□ 1.1
PTCD1-202ENST00000419981 LAMB1P07942 1786 aa21.94■■□□□ 1.1
PTCD1-202ENST00000419981 GTF2IP78347 998 aa21.94■■□□□ 1.1
PTCD1-202ENST00000419981 GRM8O00222 908 aa21.93■■□□□ 1.1
PTCD1-202ENST00000419981 TAF5LO75529 589 aa21.93■■□□□ 1.1
PTCD1-202ENST00000419981 RASAL3Q86YV0 1011 aa21.93■■□□□ 1.1
PTCD1-202ENST00000419981 KIAA0825Q8IV33 1275 aa21.93■■□□□ 1.1
PTCD1-202ENST00000419981 CD209Q9NNX6 404 aa21.93■■□□□ 1.1
PTCD1-202ENST00000419981 CCDC85CA6NKD9 419 aa21.92■■□□□ 1.1
PTCD1-202ENST00000419981 SASH1O94885 1247 aa21.92■■□□□ 1.1
PTCD1-202ENST00000419981 LMBR1LQ6UX01 489 aa21.92■■□□□ 1.1
PTCD1-202ENST00000419981 C15orf52Q6ZUT6 534 aaKnown RBP21.92■■□□□ 1.1
PTCD1-202ENST00000419981 HELBQ8NG08 1087 aaPredicted RBP21.92■■□□□ 1.1
PTCD1-202ENST00000419981 MCOLN1Q9GZU1 580 aa21.92■■□□□ 1.1
PTCD1-202ENST00000419981 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 SNAP23O00161 211 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 NF2P35240 595 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 DGKZQ13574 1117 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 CCDC57Q2TAC2 916 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 TAF7LQ5H9L4 462 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 PRAMEF18Q5VWM3 479 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 SLC4A10Q6U841 1118 aa21.91■■□□□ 1.1
PTCD1-202ENST00000419981 C9orf78Q9NZ63 289 aaPredicted RBP21.91■■□□□ 1.1
PTCD1-202ENST00000419981 COL1A1P02452 1464 aaPredicted RBP21.9■■□□□ 1.1
PTCD1-202ENST00000419981 TRPA1O75762 1119 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 ALDH1L1O75891 902 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 TTLL12Q14166 644 aaPredicted RBP21.9■■□□□ 1.1
PTCD1-202ENST00000419981 EPHA10Q5JZY3 1008 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 MOB2Q70IA6 237 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 ZNF804AQ7Z570 1209 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 APOBEC3FQ8IUX4 373 aaKnown RBP21.9■■□□□ 1.1
PTCD1-202ENST00000419981 REM2Q8IYK8 340 aaPredicted RBP21.9■■□□□ 1.1
PTCD1-202ENST00000419981 CSRNP1Q96S65 589 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 RNF186Q9NXI6 227 aa21.9■■□□□ 1.1
PTCD1-202ENST00000419981 ZNF594Q96JF6 807 aaPredicted RBP21.89■■□□□ 1.09
PTCD1-202ENST00000419981 SRCIN1Q9C0H9 1055 aa21.89■■□□□ 1.09
PTCD1-202ENST00000419981 UBE2Q2LH0YL09 131 aa21.88■■□□□ 1.09
PTCD1-202ENST00000419981 LDHAL6AQ6ZMR3 332 aa21.88■■□□□ 1.09
PTCD1-202ENST00000419981 CNNM1Q9NRU3 951 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms