RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 TSPYL4Q9UJ04 414 aa13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 ANGEL1Q9UNK9 670 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 UNCXA6NJT0 531 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 NEFMP07197 916 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 CRHR2Q13324 411 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 ZBED3Q96IU2 234 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 PRO3102Q9H379 93 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 CENPFP49454 3210 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 XDHP47989 1333 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 BRCA2P51587 3418 aa13.79□□□□□ -0.2
RAPGEF1-205ENST00000419442 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 SP3Q02447 781 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 PRKG1Q13976 671 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 SLC10A4Q96EP9 437 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-205ENST00000419442 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 OGFOD1Q8N543 542 aa13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 OTOFQ9HC10 1997 aa13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 MED23Q9ULK4 1368 aa13.77□□□□□ -0.21
RAPGEF1-205ENST00000419442 ATP5J2-PTCD1G3V325 749 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 SASH1O94885 1247 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 OTUD7BQ6GQQ9 843 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 NBPF11Q86T75 865 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 CLMNQ96JQ2 1002 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 PTCH2Q9Y6C5 1203 aa13.76□□□□□ -0.21
RAPGEF1-205ENST00000419442 GJA5P36382 358 aa13.75□□□□□ -0.21
RAPGEF1-205ENST00000419442 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
RAPGEF1-205ENST00000419442 PTPN18Q99952 460 aa13.75□□□□□ -0.21
RAPGEF1-205ENST00000419442 FZD1Q9UP38 647 aa13.75□□□□□ -0.21
RAPGEF1-205ENST00000419442 SPEF2Q9C093 1822 aa13.75□□□□□ -0.21
RAPGEF1-205ENST00000419442 ZSWIM8A7E2V4 1837 aa13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 CHPF2Q9P2E5 772 aa13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
RAPGEF1-205ENST00000419442 MYH3P11055 1940 aa13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 CCDC152Q4G0S7 254 aa13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 DEFB129Q9H1M3 183 aa13.73□□□□□ -0.21
RAPGEF1-205ENST00000419442 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-205ENST00000419442 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-205ENST00000419442 SHISA4Q96DD7 197 aa13.72□□□□□ -0.21
RAPGEF1-205ENST00000419442 COA1Q9GZY4 146 aa13.72□□□□□ -0.21
RAPGEF1-205ENST00000419442 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
RAPGEF1-205ENST00000419442 A0A1W2PPC1 479 aa13.71□□□□□ -0.21
RAPGEF1-205ENST00000419442 PDE8AO60658 829 aa13.71□□□□□ -0.21
RAPGEF1-205ENST00000419442 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
RAPGEF1-205ENST00000419442 ANKRD18AQ8IVF6 992 aa13.71□□□□□ -0.21
RAPGEF1-205ENST00000419442 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 HOXB7P09629 217 aa13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 MTMR14Q8NCE2 650 aa13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 DBF4Q9UBU7 674 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-205ENST00000419442 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 SUPT20HL1Q3ZLR7 823 aa13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 ANKRD13AQ8IZ07 590 aa13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
RAPGEF1-205ENST00000419442 RANBP2P49792 3224 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 CHL1O00533 1208 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 IREB2P48200 963 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 PRMT2P55345 433 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 BRI3BPQ8WY22 251 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 DPF3Q92784 378 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
RAPGEF1-205ENST00000419442 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 RIPK4P57078 832 aa13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 TAF1CQ15572 869 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 NBPF12Q5TAG4 269 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 CCDC191Q8NCU4 936 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms