RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 RABL6Q3YEC7 729 aaPredicted RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 RBM26Q5T8P6 1007 aaKnown RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 CDC37L1Q7L3B6 337 aa20.74■□□□□ 0.91
LINC00404-201ENST00000418660 HELBQ8NG08 1087 aaPredicted RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 GMLQ99445 158 aa20.74■□□□□ 0.91
LINC00404-201ENST00000418660 GLIS2Q9BZE0 524 aaPredicted RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 BICC1Q9H694 974 aaKnown RBP20.74■□□□□ 0.91
LINC00404-201ENST00000418660 PSME4Q14997 1843 aa20.74■□□□□ 0.91
LINC00404-201ENST00000418660 EGFRP00533 1210 aa20.73■□□□□ 0.91
LINC00404-201ENST00000418660 ZNF280AP59817 542 aaPredicted RBP20.73■□□□□ 0.91
LINC00404-201ENST00000418660 STRIP1Q5VSL9 837 aa20.73■□□□□ 0.91
LINC00404-201ENST00000418660 C15orf52Q6ZUT6 534 aaKnown RBP20.73■□□□□ 0.91
LINC00404-201ENST00000418660 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
LINC00404-201ENST00000418660 RASSF10A6NK89 507 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 SNAP23O00161 211 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 USP17L8P0C7I0 530 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 KIF4BQ2VIQ3 1234 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 DACT2Q5SW24 774 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 CST9Q5W186 159 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 ANKRD44Q8N8A2 993 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 IRS2Q9Y4H2 1338 aa20.72■□□□□ 0.91
LINC00404-201ENST00000418660 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
LINC00404-201ENST00000418660 DEFB115Q30KQ5 88 aa20.71■□□□□ 0.91
LINC00404-201ENST00000418660 ABT1Q9ULW3 272 aaKnown RBP20.71■□□□□ 0.91
LINC00404-201ENST00000418660 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
LINC00404-201ENST00000418660 PLIN1O60240 522 aa20.7■□□□□ 0.9
LINC00404-201ENST00000418660 USP48Q86UV5 1035 aa20.7■□□□□ 0.9
LINC00404-201ENST00000418660 ARHGAP45Q92619 1136 aa20.7■□□□□ 0.9
LINC00404-201ENST00000418660 CD209Q9NNX6 404 aa20.7■□□□□ 0.9
LINC00404-201ENST00000418660 VEGFBP49765 207 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 TTLL5Q6EMB2 1281 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 DCPSQ96C86 337 aaKnown RBP20.69■□□□□ 0.9
LINC00404-201ENST00000418660 MXD3Q9BW11 206 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 PUS3Q9BZE2 481 aaKnown RBP20.69■□□□□ 0.9
LINC00404-201ENST00000418660 MYOZ2Q9NPC6 264 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 RIPOR2Q9Y4F9 1068 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 A0A1B0GUL6 1792 aa20.69■□□□□ 0.9
LINC00404-201ENST00000418660 CELF2O95319 508 aaKnown RBP20.68■□□□□ 0.9
LINC00404-201ENST00000418660 KRT26Q7Z3Y9 468 aa20.68■□□□□ 0.9
LINC00404-201ENST00000418660 ZNF804AQ7Z570 1209 aa20.68■□□□□ 0.9
LINC00404-201ENST00000418660 MROH5Q6ZUA9 1318 aa20.68■□□□□ 0.9
LINC00404-201ENST00000418660 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
LINC00404-201ENST00000418660 MMP14P50281 582 aa20.67■□□□□ 0.9
LINC00404-201ENST00000418660 GTF2IP78347 998 aa20.67■□□□□ 0.9
LINC00404-201ENST00000418660 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
LINC00404-201ENST00000418660 OGFOD1Q8N543 542 aa20.67■□□□□ 0.9
LINC00404-201ENST00000418660 TLL2Q9Y6L7 1015 aa20.67■□□□□ 0.9
LINC00404-201ENST00000418660 IL1R1P14778 569 aa20.66■□□□□ 0.9
LINC00404-201ENST00000418660 SCARF1Q14162 830 aa20.66■□□□□ 0.9
LINC00404-201ENST00000418660 GGA3Q9NZ52 723 aa20.66■□□□□ 0.9
LINC00404-201ENST00000418660 ZNF646O15015 1829 aaPredicted RBP20.66■□□□□ 0.9
LINC00404-201ENST00000418660 ASTN2O75129 1339 aaPredicted RBP20.65■□□□□ 0.9
LINC00404-201ENST00000418660 UBTFL1P0CB47 393 aaPredicted RBP20.65■□□□□ 0.9
LINC00404-201ENST00000418660 HSPA1AP0DMV8 641 aaKnown RBP20.65■□□□□ 0.9
LINC00404-201ENST00000418660 HSPA1BP0DMV9 641 aaKnown RBP20.65■□□□□ 0.9
LINC00404-201ENST00000418660 LRRC24Q50LG9 513 aa20.65■□□□□ 0.9
LINC00404-201ENST00000418660 SULF1Q8IWU6 871 aa20.65■□□□□ 0.9
LINC00404-201ENST00000418660 ZNF408Q9H9D4 720 aa20.65■□□□□ 0.9
LINC00404-201ENST00000418660 WDR33Q9C0J8 1336 aaKnown RBP20.64■□□□□ 0.89
LINC00404-201ENST00000418660 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
LINC00404-201ENST00000418660 IPO8O15397 1037 aaKnown RBP20.64■□□□□ 0.89
LINC00404-201ENST00000418660 SAPCD2Q86UD0 394 aa20.64■□□□□ 0.89
LINC00404-201ENST00000418660 HDAC5Q9UQL6 1122 aa20.64■□□□□ 0.89
LINC00404-201ENST00000418660 ANGEL2Q5VTE6 544 aaKnown RBP20.63■□□□□ 0.89
LINC00404-201ENST00000418660 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
LINC00404-201ENST00000418660 DLK2Q6UY11 383 aa20.63■□□□□ 0.89
LINC00404-201ENST00000418660 KLHDC4Q8TBB5 520 aa20.63■□□□□ 0.89
LINC00404-201ENST00000418660 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
LINC00404-201ENST00000418660 PITPNM2Q9BZ72 1349 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 BCAR3O75815 825 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 ECE1P42892 770 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 RFX5P48382 616 aaPredicted RBP20.62■□□□□ 0.89
LINC00404-201ENST00000418660 METTL24Q5JXM2 366 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 HHIPL1Q96JK4 782 aa20.62■□□□□ 0.89
LINC00404-201ENST00000418660 SASH1O94885 1247 aa20.61■□□□□ 0.89
LINC00404-201ENST00000418660 PDE8BO95263 885 aa20.61■□□□□ 0.89
LINC00404-201ENST00000418660 HIBADHP31937 336 aaKnown RBP20.61■□□□□ 0.89
LINC00404-201ENST00000418660 FKBP1AP62942 108 aaKnown RBP20.61■□□□□ 0.89
LINC00404-201ENST00000418660 NBPF9Q3BBW0 867 aa20.61■□□□□ 0.89
LINC00404-201ENST00000418660 PAXIP1Q6ZW49 1069 aaPredicted RBP20.61■□□□□ 0.89
LINC00404-201ENST00000418660 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
LINC00404-201ENST00000418660 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
LINC00404-201ENST00000418660 CAPNS2Q96L46 248 aa20.61■□□□□ 0.89
LINC00404-201ENST00000418660 EYA2O00167 538 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 GYG1P46976 350 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 PTPN12Q05209 780 aaKnown RBP20.6■□□□□ 0.89
LINC00404-201ENST00000418660 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 ATF7IPQ6VMQ6 1270 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 CERS5Q8N5B7 392 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
LINC00404-201ENST00000418660 FRAT1Q92837 279 aaPredicted RBP20.6■□□□□ 0.89
LINC00404-201ENST00000418660 MEIS3Q99687 375 aa20.6■□□□□ 0.89
LINC00404-201ENST00000418660 LRRFIP2Q9Y608 721 aaKnown RBP20.6■□□□□ 0.89
LINC00404-201ENST00000418660 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
LINC00404-201ENST00000418660 FAM205AQ6ZU69 1335 aa20.59■□□□□ 0.89
LINC00404-201ENST00000418660 WNT10BO00744 389 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms